Os07g0615500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF581 family protein.
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Os07g0615500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF581 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 91.19 | 0.449 | 3.14 | 0.046 | 0.0281 | 0.597 | -0.417 | 2.26 | -0.0433 | 6.54 | 60 | 15 | -- | -- |
| 94.78 | 0.453 | 3.15 | 0.102 | 0.0102 | 0.896 | -0.359 | -- | -0.0404 | 6.57 | 60 | 15 | -- | -- |
| 91.6 | 0.446 | 3.14 | 0.0437 | 0.0351 | 0.601 | -- | 2.22 | -0.0424 | 8.98 | 60.35 | 15 | -- | -- |
| 95.08 | 0.454 | 3.14 | 0.0859 | 0.0285 | 0.89 | -- | -- | -0.0328 | 9.08 | 60 | 15 | -- | -- |
| 91.66 | 0.446 | 3.14 | 0.0422 | -- | 0.607 | -- | 2.22 | -0.0414 | -- | 60 | 15 | -- | -- |
| 98.54 | 0.465 | 3.15 | 0.0918 | 0.0193 | -- | 0.47 | -- | -0.0472 | 15.9 | -- | -- | -- | -- |
| 98.94 | 0.466 | 3.15 | 0.0987 | 0.0652 | -- | -- | -- | -0.0447 | 10.8 | -- | -- | -- | -- |
| 95.13 | 0.454 | 3.14 | 0.0864 | -- | 0.913 | -- | -- | -0.0307 | -- | 60 | 15 | -- | -- |
| 95.28 | 0.455 | 3.15 | -- | 0.0294 | 0.908 | -- | -- | -0.0397 | 8.64 | 60 | 15 | -- | -- |
| 99.21 | 0.465 | 3.15 | 0.0973 | -- | -- | -- | -- | -0.0451 | -- | -- | -- | -- | -- |
| 99.2 | 0.466 | 3.15 | -- | 0.0645 | -- | -- | -- | -0.0557 | 10.7 | -- | -- | -- | -- |
| 95.32 | 0.455 | 3.15 | -- | -- | 0.918 | -- | -- | -0.0401 | -- | 60 | 15 | -- | -- |
| 99.46 | 0.465 | 3.15 | -- | -- | -- | -- | -- | -0.0559 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 77.12 | humidity | 70 | 90 | < th | dose independent | rect. | 18 | 14 |
| 2 | 77.15 | humidity | 70 | 90 | < th | dose dependent | rect. | 18 | 14 |
| 3 | 77.23 | humidity | 70 | 10 | < th | dose independent | rect. | 18 | 14 |
| 7 | 77.24 | humidity | 80 | 90 | < th | dose independent | rect. | 24 | 7 |
| 9 | 77.29 | humidity | 70 | 10 | < th | dose dependent | rect. | 17 | 16 |
| 27 | 77.47 | humidity | 80 | 90 | < th | dose dependent | rect. | 24 | 7 |
| 31 | 77.59 | radiation | 30 | 30 | > th | dose dependent | rect. | 7 | 2 |
| 114 | 77.69 | humidity | 80 | 90 | < th | dose independent | rect. | 5 | 2 |
| 115 | 77.69 | humidity | 80 | 90 | < th | dose dependent | rect. | 5 | 2 |
| 121 | 77.72 | radiation | 30 | 30 | > th | dose independent | rect. | 7 | 1 |
| 137 | 77.73 | humidity | 70 | 10 | < th | dose independent | rect. | 7 | 1 |
| 198 | 77.73 | humidity | 70 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 201 | 77.73 | radiation | 10 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 392 | 78.04 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 7 | 1 |
| 820 | 84.03 | radiation | 30 | 30 | < th | dose independent | sin | 11 | NA |
| 835 | 84.25 | humidity | 70 | 10 | < th | dose independent | sin | 11 | NA |
| 867 | 84.77 | humidity | 70 | 90 | < th | dose independent | sin | 11 | NA |
| 934 | 85.57 | humidity | 70 | 90 | > th | dose independent | sin | 11 | NA |
| 938 | 85.68 | humidity | 70 | 10 | > th | dose independent | sin | 11 | NA |
| 995 | 86.67 | radiation | 20 | 10 | > th | dose independent | sin | 11 | NA |