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Os07g0607300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Bromo adjacent region domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.5 (0.0165) R2 : 0.00104
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0239 (0.0347) R2dN8 : 0.00134 R2N8 : 0.00104
σ : 0.31
deviance : 44.23
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
19.62 0.208 11.4 0.787 0.12 -0.358 0.288 -0.848 0.16 22.1 9.002 4435 -- --
20.02 0.208 11.4 0.841 0.121 -0.243 0.31 -- 0.139 22.4 8.828 4449 -- --
19.92 0.208 11.4 0.776 0.119 -0.361 -- -0.894 0.161 21.5 9 4441 -- --
20.37 0.21 11.5 0.831 0.124 -0.231 -- -- 0.137 21.7 8.843 4449 -- --
20.78 0.212 11.4 0.778 -- -0.385 -- -0.885 0.158 -- 9.057 4440 -- --
21.42 0.217 11.5 0.899 0.161 -- 0.284 -- 0.123 22.4 -- -- -- --
21.74 0.218 11.5 0.889 0.161 -- -- -- 0.122 22.1 -- -- -- --
20.02 0.208 11.5 0.778 -- -0.316 -- -- 0.135 -- 10.41 4401 -- --
30.03 0.255 11.5 -- 0.152 -0.593 -- -- 0.0516 21 8.387 17230 -- --
23.3 0.226 11.5 0.891 -- -- -- -- 0.123 -- -- -- -- --
42.55 0.305 11.5 -- 0.166 -- -- -- 0.0235 22.5 -- -- -- --
31.39 0.261 11.5 -- -- -0.603 -- -- 0.0527 -- 8.4 17229 -- --
44.23 0.31 11.5 -- -- -- -- -- 0.0239 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 19.08 atmosphere 1000 720 > th dose dependent rect. 15 1
2 19.10 wind 9 4320 > th dose independent rect. 15 1
3 19.10 wind 9 4320 > th dose dependent rect. 13 3
5 19.13 humidity 80 4320 < th dose dependent rect. 21 1
7 19.14 atmosphere 1005 720 > th dose independent rect. 15 1
9 19.15 wind 9 4320 > th dose dependent rect. 3 13
17 19.18 wind 9 4320 < th dose independent rect. 15 1
39 19.29 wind 9 4320 > th dose dependent sin 5 NA
44 19.32 atmosphere 995 720 > th dose dependent rect. 13 6
52 19.34 wind 9 4320 > th dose independent rect. 3 13
63 19.36 atmosphere 1000 30 > th dose independent rect. 13 23
95 19.41 temperature 30 14400 > th dose dependent rect. 8 1
129 19.47 temperature 30 14400 > th dose independent rect. 8 1
151 19.48 atmosphere 995 270 > th dose dependent rect. 14 13
152 19.49 humidity 80 4320 < th dose independent rect. 21 2
153 19.49 wind 9 4320 < th dose independent rect. 3 13
159 19.50 atmosphere 1005 720 > th dose independent rect. 13 6
160 19.50 wind 9 4320 < th dose independent rect. 1 15
164 19.50 atmosphere 1000 30 > th dose dependent rect. 15 12
173 19.53 temperature 30 14400 < th dose independent rect. 8 1
174 19.53 temperature 30 14400 < th dose independent rect. 6 3
175 19.53 temperature 30 14400 < th dose independent rect. 3 6
176 19.53 temperature 30 14400 < th dose independent rect. 1 8
183 19.54 atmosphere 1005 720 > th dose independent rect. 13 4
184 19.54 temperature 30 14400 < th dose independent rect. 23 10
196 19.55 temperature 30 14400 < th dose independent rect. 19 14
203 19.56 wind 9 4320 > th dose independent sin 4 NA
205 19.56 temperature 30 14400 < th dose independent rect. 21 12
220 19.57 atmosphere 1010 720 < th dose dependent rect. 12 8
239 19.58 humidity 70 4320 > th dose dependent rect. 24 1
248 19.58 atmosphere 1010 270 < th dose dependent rect. 17 9
260 19.59 humidity 50 4320 > th dose dependent rect. 24 1
266 19.59 humidity 80 4320 < th dose dependent rect. 20 4
280 19.60 wind 9 4320 < th dose independent rect. 19 21
304 19.61 wind 9 4320 > th dose independent rect. 13 19
312 19.62 radiation 20 4320 > th dose independent rect. 13 3
349 19.64 humidity 80 4320 > th dose independent rect. 22 1
350 19.64 radiation 40 14400 < th dose independent rect. 10 1
360 19.65 radiation 40 14400 > th dose independent rect. 10 1
412 19.67 radiation 1 43200 < th dose dependent rect. 1 1
417 19.68 radiation 20 4320 < th dose independent rect. 13 3
421 19.68 radiation 20 4320 < th dose independent rect. 13 5
429 19.68 radiation 20 4320 < th dose independent rect. 13 13
430 19.68 radiation 20 4320 < th dose independent rect. 13 15
540 19.72 radiation 30 14400 > th dose dependent rect. 10 1
546 19.72 wind 9 4320 > th dose dependent rect. 13 18
550 19.73 wind 9 4320 < th dose independent sin 5 NA
555 19.73 atmosphere 1005 720 < th dose independent rect. 12 8
558 19.73 atmosphere 1000 30 > th dose independent rect. 15 21
585 19.74 wind 9 4320 < th dose independent rect. 13 19
602 19.75 atmosphere 1010 4320 < th dose independent rect. 18 1
603 19.75 radiation 20 4320 > th dose independent rect. 13 1
612 19.75 humidity 80 4320 < th dose independent rect. 17 8
635 19.76 atmosphere 1010 4320 > th dose independent rect. 18 1
656 19.76 radiation 30 14400 > th dose dependent rect. 10 3
677 19.77 radiation 20 4320 > th dose independent sin 16 NA
707 19.77 humidity 90 4320 < th dose dependent rect. 24 1
712 19.77 atmosphere 1000 720 > th dose dependent rect. 9 10
724 19.78 wind 9 4320 > th dose independent no NA NA
776 19.78 wind 9 4320 > th dose independent rect. 9 23
781 19.78 radiation 20 4320 < th dose dependent rect. 15 1
798 19.79 radiation 20 4320 < th dose independent sin 16 NA
808 19.79 temperature 15 720 > th dose dependent rect. 12 1
821 19.80 atmosphere 1010 4320 > th dose independent rect. 15 1
822 19.80 atmosphere 1010 4320 < th dose independent rect. 15 1
826 19.80 humidity 80 4320 > th dose independent rect. 21 4
827 19.80 atmosphere 1010 4320 > th dose independent rect. 15 4
835 19.80 radiation 30 4320 > th dose independent rect. 10 6
836 19.80 radiation 30 4320 < th dose independent rect. 10 6
842 19.80 radiation 30 4320 < th dose independent rect. 10 8
865 19.80 radiation 30 4320 < th dose independent rect. 10 19
875 19.80 atmosphere 1005 4320 > th dose dependent rect. 14 1
876 19.80 radiation 1 14400 > th dose dependent rect. 12 1
901 19.81 atmosphere 1005 720 < th dose independent rect. 14 1
904 19.81 wind 1 43200 > th dose independent rect. 2 2
907 19.81 atmosphere 1005 720 < th dose independent rect. 13 4
908 19.81 atmosphere 1010 4320 < th dose independent rect. 15 4
918 19.81 humidity 80 4320 > th dose independent rect. 18 7
954 19.81 wind 9 4320 > th dose independent rect. 7 23
993 19.82 radiation 30 14400 < th dose independent rect. 6 7