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Os07g0604800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Alpha-1,4-glucan-protein synthase [UDP-forming] 1 (EC 2.4.1.112) (UDP- glucose:protein transglucosylase 1) (UPTG 1).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.2 (0.0228) R2 : 0.00129
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.037 (0.0481) R2dN8 : 0.00167 R2N8 : 0.00129
σ : 0.43
deviance : 84.9
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
48.34 0.327 10.2 0.42 0.459 -1.07 0.184 -1.24 -0.11 6.6 1.639 5791 -- --
52.01 0.336 10.2 0.413 0.435 -1.04 0.211 -- -0.107 6.55 1.83 5809 -- --
48.4 0.324 10.2 0.423 0.464 -1.08 -- -1.25 -0.11 6.52 1.63 5801 -- --
51.86 0.335 10.2 0.366 0.501 -1 -- -- -0.0724 5.87 1.826 5875 -- --
59.37 0.359 10.2 0.462 -- -1.12 -- -1.37 -0.0986 -- 1.631 5803 -- --
69.27 0.39 10.2 0.336 0.483 -- 0.252 -- 0.0669 6.6 -- -- -- --
69.43 0.39 10.2 0.34 0.484 -- -- -- 0.0663 6.67 -- -- -- --
62.73 0.369 10.2 0.368 -- -0.971 -- -- -0.0793 -- 1.822 5803 -- --
51.45 0.334 10.2 -- 0.575 -1.12 -- -- -0.172 5.45 1.689 5914 -- --
81.64 0.422 10.2 0.351 -- -- -- -- 0.076 -- -- -- -- --
72.48 0.398 10.2 -- 0.488 -- -- -- 0.0284 6.62 -- -- -- --
62.26 0.367 10.3 -- -- -1.04 -- -- -0.17 -- 1.68 5803 -- --
84.9 0.43 10.2 -- -- -- -- -- 0.037 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 44.54 humidity 70 14400 < th dose dependent rect. 18 1
3 44.86 humidity 70 14400 < th dose dependent rect. 18 13
4 44.93 humidity 70 14400 < th dose dependent rect. 18 4
15 45.59 humidity 70 14400 < th dose independent rect. 19 12
16 45.64 radiation 1 4320 > th dose dependent rect. 18 12
17 45.68 humidity 70 14400 < th dose independent rect. 19 1
28 45.88 humidity 60 14400 < th dose independent rect. 17 15
29 45.89 humidity 60 14400 < th dose independent rect. 17 2
31 45.91 humidity 60 14400 < th dose independent rect. 17 4
42 45.96 radiation 1 4320 > th dose dependent rect. 4 2
62 46.14 radiation 20 4320 < th dose dependent rect. 18 12
68 46.21 radiation 10 14400 > th dose dependent rect. 17 1
82 46.34 humidity 60 14400 < th dose dependent rect. 16 4
95 46.40 radiation 10 14400 < th dose independent rect. 17 1
97 46.47 humidity 60 14400 > th dose independent rect. 17 4
99 46.48 humidity 60 14400 > th dose independent rect. 17 11
103 46.49 humidity 60 14400 > th dose independent rect. 17 9
110 46.52 radiation 20 14400 < th dose independent rect. 16 15
111 46.52 radiation 20 4320 < th dose dependent rect. 1 5
143 46.72 radiation 20 4320 < th dose dependent rect. 23 7
147 46.74 radiation 10 14400 < th dose independent rect. 17 11
148 46.75 radiation 10 14400 < th dose independent rect. 17 4
156 46.77 radiation 10 14400 < th dose independent rect. 17 9
165 46.79 humidity 70 14400 > th dose independent rect. 19 2
169 46.83 humidity 70 14400 > th dose independent rect. 19 5
170 46.83 humidity 70 14400 > th dose independent rect. 19 9
175 46.85 humidity 70 14400 > th dose independent rect. 19 7
192 47.04 radiation 20 4320 > th dose dependent rect. 16 16
195 47.08 radiation 40 14400 < th dose dependent rect. 18 3
229 47.31 radiation 40 14400 < th dose dependent rect. 18 6
232 47.34 radiation 40 4320 < th dose dependent rect. 17 15
237 47.41 radiation 40 14400 < th dose dependent rect. 18 8
239 47.41 radiation 40 4320 > th dose dependent rect. 13 20
286 47.57 radiation 30 14400 > th dose independent rect. 7 1
307 47.57 radiation 40 4320 > th dose dependent rect. 13 1
318 47.64 wind 5 43200 < th dose independent rect. 5 2
340 47.66 radiation 40 4320 > th dose dependent sin 13 NA
343 47.70 radiation 20 4320 < th dose independent rect. 18 14
344 47.71 radiation 20 4320 < th dose independent rect. 2 6
348 47.73 radiation 20 4320 < th dose independent rect. 5 3
351 47.74 radiation 20 4320 < th dose independent rect. 23 9
370 47.79 wind 5 43200 > th dose independent rect. 5 2
380 47.86 radiation 40 4320 < th dose independent sin 12 NA
415 48.04 radiation 40 14400 < th dose independent rect. 8 1
461 48.12 radiation 40 14400 < th dose independent rect. 19 14
470 48.13 radiation 40 14400 < th dose independent rect. 1 8
480 48.15 radiation 40 14400 < th dose independent rect. 23 10
510 48.23 wind 3 43200 > th dose independent rect. 3 2
513 48.24 humidity 60 43200 > th dose independent rect. 15 1
517 48.26 wind 3 43200 > th dose dependent rect. 5 1
528 48.35 temperature 30 14400 > th dose independent rect. 17 1
566 48.43 wind 3 43200 < th dose independent rect. 3 1
572 48.46 temperature 30 14400 < th dose independent rect. 17 9
573 48.46 temperature 30 14400 < th dose independent rect. 17 11
577 48.47 temperature 30 14400 < th dose independent rect. 17 3
580 48.47 temperature 30 14400 < th dose independent rect. 17 7
588 48.49 temperature 30 14400 < th dose independent rect. 17 1
641 48.57 humidity 50 14400 < th dose independent rect. 17 17
650 48.58 wind 5 43200 < th dose dependent rect. 3 1
670 48.64 radiation 40 4320 < th dose independent rect. 13 21
673 48.65 wind 1 43200 > th dose dependent rect. 3 1
674 48.66 humidity 50 14400 > th dose independent rect. 16 17
676 48.66 wind 9 43200 < th dose dependent rect. 3 1
685 48.68 wind 3 43200 > th dose dependent rect. 4 3
739 48.74 humidity 90 43200 > th dose independent rect. 8 2
751 48.78 humidity 90 43200 > th dose dependent rect. 9 1
812 48.85 wind 5 43200 < th dose independent rect. 4 9
816 48.85 wind 9 43200 > th dose independent rect. 19 11
830 48.86 wind 5 43200 < th dose independent rect. 3 11
867 48.89 humidity 60 43200 < th dose independent rect. 14 3
878 48.90 wind 5 43200 > th dose independent rect. 5 8
879 48.90 wind 5 43200 > th dose independent rect. 4 10
882 48.90 wind 9 43200 < th dose independent rect. 19 11
891 48.91 radiation 20 4320 > th dose dependent rect. 6 2
908 48.92 temperature 30 14400 > th dose dependent rect. 17 1
911 48.92 wind 3 43200 > th dose dependent rect. 3 10
912 48.93 humidity 90 43200 < th dose independent rect. 8 2
934 48.96 wind 5 43200 < th dose independent sin 5 NA
943 48.97 radiation 1 4320 > th dose dependent sin 12 NA
964 48.99 radiation 1 14400 < th dose independent rect. 17 18
987 49.00 wind 5 43200 > th dose independent sin 5 NA