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Os07g0603200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : WD40-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.74 (0.0293) R2 : 0.776
β1 : 1.9 (0.107) R2dD : 0.161 R2D : 0.12
β2 : 1.6 (0.088) R2dC : 0.237 R2C : 0.449
β3 : -1.28 (0.0803) R2dE : 0.186 R2E : 0.392
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.324 (0.0627) R2dN8 : 0.0173 R2N8 : -0.0166
σ : 0.547
deviance : 137.75
__
_____
C
peak time of C : 15.5
E
wheather : wind
threshold : 4.6
memory length : 96
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 3.1
open length of G : 5.25

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
135.12 0.546 9.75 1.88 1.61 -1.27 0.868 -0.124 0.308 15.5 4.662 96 3.1 5.22
135.11 0.541 9.75 1.88 1.62 -1.27 0.935 -- 0.312 15.5 4.645 97 3.1 5.22
136.99 0.545 9.75 1.86 1.61 -1.3 -- -0.501 0.305 15.4 4.608 94 3.12 5.15
137.75 0.547 9.74 1.9 1.6 -1.28 -- -- 0.324 15.5 4.6 96 3.1 5.25
221.35 0.693 9.73 1.85 -- -1.93 -- -0.638 0.347 -- 11.49 63 2.35 6.23
186.22 0.64 9.79 1.82 2.53 -- 1.4 -- 0.219 16.5 -- -- -- --
191.48 0.648 9.79 1.83 2.53 -- -- -- 0.226 16.5 -- -- -- --
198.69 0.656 9.73 1.85 -- -1.98 -- -- 0.347 -- 33.46 139 0.277 7.65
233.35 0.711 9.79 -- 1.58 -1.26 -- -- 0.155 15.4 4.693 82 3.2 5.4
535.29 1.08 9.77 1.73 -- -- -- -- 0.159 -- -- -- -- --
279.61 0.782 9.83 -- 2.5 -- -- -- 0.0225 16.5 -- -- -- --
290.88 0.794 9.77 -- -- -1.97 -- -- 0.167 -- 37.43 144 0.3 7.5
614.19 1.16 9.81 -- -- -- -- -- -0.0326 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 136.50 wind 5.0 90 < th dose independent rect. 3 5
2 137.18 wind 5.0 270 < th dose independent rect. 3 2
3 138.64 precipitation 0.1 90 < th dose independent rect. 3 5
4 138.64 precipitation 0.1 90 < th dose dependent rect. 3 5
6 139.23 wind 9.0 90 < th dose independent rect. 8 19
9 139.34 temperature 10.0 90 > th dose independent rect. 3 5
11 139.34 temperature 30.0 90 < th dose independent rect. 3 5
12 139.34 humidity 50.0 90 > th dose independent rect. 3 5
14 139.34 atmosphere 995.0 90 > th dose independent rect. 3 5
15 139.34 atmosphere 1015.0 90 < th dose independent rect. 3 5
16 139.34 temperature 10.0 90 > th dose independent rect. 8 19
17 139.38 precipitation 0.1 90 < th dose independent rect. 8 19
18 139.38 precipitation 0.1 90 < th dose dependent rect. 8 19
19 139.51 radiation 40.0 90 < th dose independent rect. 3 5
21 139.95 wind 5.0 270 < th dose independent rect. 1 6
23 139.99 precipitation 0.1 270 < th dose independent rect. 3 2
24 139.99 precipitation 0.1 270 < th dose dependent rect. 3 2
25 140.01 wind 9.0 270 < th dose independent rect. 5 22
29 140.74 temperature 10.0 270 > th dose independent rect. 3 2
31 140.74 temperature 30.0 270 < th dose independent rect. 3 2
32 140.74 humidity 50.0 270 > th dose independent rect. 3 2
35 140.74 atmosphere 995.0 270 > th dose independent rect. 3 2
36 140.74 atmosphere 1010.0 270 < th dose independent rect. 3 2
38 140.74 radiation 20.0 270 < th dose independent rect. 3 2
41 140.74 temperature 10.0 270 > th dose independent rect. 5 22
42 140.74 radiation 1.0 270 < th dose dependent rect. 3 2
43 140.79 radiation 40.0 270 < th dose dependent rect. 3 2
47 140.96 radiation 1.0 270 < th dose independent rect. 3 2
49 141.05 atmosphere 995.0 90 > th dose independent rect. 8 19
50 141.20 wind 9.0 90 < th dose dependent rect. 3 5
52 141.23 wind 5.0 10 < th dose independent rect. 3 6
53 141.44 wind 1.0 270 > th dose independent rect. 3 2
57 142.01 wind 9.0 270 < th dose dependent rect. 3 2
60 142.12 precipitation 0.1 10 < th dose independent rect. 3 6
61 142.12 precipitation 0.1 10 < th dose dependent rect. 3 6
64 142.56 temperature 15.0 90 > th dose independent rect. 15 17
72 143.11 wind 9.0 270 < th dose independent rect. 6 20
76 143.22 temperature 10.0 10 > th dose independent rect. 3 6
78 143.22 temperature 30.0 10 < th dose independent rect. 3 6
79 143.22 humidity 50.0 10 > th dose independent rect. 3 6
81 143.22 atmosphere 995.0 10 > th dose independent rect. 3 6
82 143.22 atmosphere 1015.0 10 < th dose independent rect. 3 6
83 143.22 wind 9.0 10 < th dose independent rect. 9 18
84 143.22 temperature 10.0 10 > th dose independent rect. 9 18
86 143.41 precipitation 0.1 10 < th dose independent rect. 9 18
87 143.41 precipitation 0.1 10 < th dose dependent rect. 9 18
92 143.56 radiation 40.0 90 < th dose dependent rect. 3 6
102 143.71 precipitation 0.1 270 < th dose independent rect. 5 22
103 143.71 precipitation 0.1 270 < th dose dependent rect. 5 22
104 143.75 radiation 20.0 270 < th dose dependent rect. 1 7
120 143.83 temperature 10.0 270 > th dose independent rect. 6 20
125 143.91 radiation 40.0 270 < th dose dependent rect. 2 4
129 143.99 temperature 30.0 270 < th dose dependent rect. 3 2
136 144.23 radiation 40.0 10 < th dose independent rect. 3 6
137 144.23 atmosphere 995.0 90 > th dose dependent rect. 3 5
138 144.24 radiation 10.0 270 < th dose independent rect. 1 6
156 144.53 atmosphere 995.0 10 > th dose independent rect. 9 18
161 144.58 wind 9.0 10 < th dose dependent rect. 3 6
168 144.67 precipitation 0.1 90 < th dose independent rect. 8 7
169 144.67 precipitation 0.1 90 < th dose dependent rect. 8 7
175 144.75 temperature 10.0 90 > th dose dependent rect. 3 5
176 144.79 radiation 40.0 90 < th dose independent rect. 13 19
191 144.86 atmosphere 1000.0 270 > th dose independent rect. 18 8
204 144.98 precipitation 0.1 270 < th dose independent rect. 6 20
205 144.98 precipitation 0.1 270 < th dose dependent rect. 6 20
218 145.03 temperature 15.0 10 > th dose independent rect. 15 18
219 145.04 temperature 10.0 90 > th dose independent rect. 8 7
220 145.04 atmosphere 1015.0 90 < th dose independent rect. 8 7
233 145.22 wind 1.0 270 > th dose independent rect. 1 5
249 145.30 atmosphere 995.0 90 > th dose independent rect. 8 7
273 145.47 humidity 50.0 270 > th dose dependent rect. 3 2
278 145.49 temperature 10.0 1440 > th dose independent rect. 4 6
283 145.49 atmosphere 995.0 1440 > th dose independent rect. 4 6
285 145.49 atmosphere 1015.0 1440 < th dose independent rect. 4 6
287 145.49 temperature 10.0 1440 > th dose independent rect. 10 18
291 145.51 radiation 40.0 90 < th dose independent rect. 15 17
298 145.57 temperature 15.0 270 > th dose independent rect. 11 10
315 145.69 wind 9.0 90 < th dose independent rect. 8 7
333 145.84 wind 1.0 90 > th dose independent rect. 8 7
357 145.98 wind 9.0 90 < th dose independent rect. 15 17
360 146.01 atmosphere 995.0 270 > th dose independent rect. 6 20
365 146.08 radiation 1.0 90 > th dose independent rect. 8 7
366 146.08 atmosphere 1015.0 90 < th dose independent rect. 15 17
419 146.35 precipitation 0.1 270 < th dose independent rect. 6 7
420 146.35 precipitation 0.1 270 < th dose dependent rect. 6 7
425 146.40 temperature 10.0 270 > th dose independent rect. 6 7
426 146.40 atmosphere 995.0 270 > th dose independent rect. 6 7
427 146.40 atmosphere 1015.0 270 < th dose independent rect. 6 7
429 146.40 atmosphere 995.0 270 > th dose dependent rect. 3 2
432 146.42 wind 9.0 270 < th dose independent rect. 6 7
488 146.67 humidity 50.0 90 > th dose independent rect. 8 19
509 146.92 humidity 50.0 270 > th dose independent rect. 6 7
510 146.92 temperature 10.0 270 > th dose dependent rect. 3 2
511 146.96 temperature 30.0 90 < th dose dependent rect. 3 5
512 146.97 atmosphere 995.0 270 > th dose independent rect. 5 22
519 147.03 atmosphere 1015.0 270 < th dose independent rect. 11 10
526 147.11 precipitation 0.1 270 < th dose independent rect. 13 17
528 147.11 precipitation 0.1 270 < th dose dependent rect. 13 17
552 147.24 atmosphere 995.0 10 > th dose dependent rect. 3 6
559 147.34 humidity 50.0 270 > th dose independent rect. 21 14
563 147.37 wind 9.0 1440 < th dose independent rect. 4 5
567 147.37 humidity 50.0 1440 > th dose independent rect. 4 5
576 147.41 temperature 10.0 270 > th dose dependent rect. 9 1
578 147.45 radiation 1.0 10 > th dose independent rect. 9 6
581 147.45 temperature 10.0 90 > th dose dependent rect. 8 6
591 147.55 humidity 50.0 90 > th dose dependent rect. 3 5
595 147.59 temperature 10.0 10 > th dose independent rect. 9 6
597 147.59 atmosphere 995.0 10 > th dose independent rect. 9 6
598 147.59 atmosphere 1015.0 10 < th dose independent rect. 9 6
599 147.59 precipitation 0.1 10 < th dose independent rect. 9 6
601 147.59 precipitation 0.1 10 < th dose dependent rect. 9 6
605 147.62 temperature 10.0 270 > th dose independent rect. 21 14
606 147.62 atmosphere 995.0 270 > th dose independent rect. 21 14
610 147.65 atmosphere 1015.0 10 < th dose independent rect. 15 18
622 147.77 wind 1.0 90 > th dose independent rect. 8 19
623 147.79 humidity 50.0 270 > th dose independent rect. 9 1
642 147.91 atmosphere 995.0 90 > th dose independent rect. 15 17
644 147.93 radiation 40.0 90 < th dose dependent rect. 3 8
650 147.98 wind 9.0 270 < th dose independent rect. 21 14
665 148.01 precipitation 0.1 10 < th dose independent rect. 15 18
668 148.01 precipitation 0.1 10 < th dose dependent rect. 15 18
669 148.02 temperature 10.0 10 > th dose dependent rect. 3 6
673 148.06 temperature 10.0 270 > th dose independent rect. 9 1
674 148.06 atmosphere 995.0 270 > th dose independent rect. 9 1
675 148.06 atmosphere 1015.0 270 < th dose independent rect. 9 1
676 148.06 temperature 10.0 270 > th dose independent rect. 10 23
678 148.07 precipitation 0.1 270 < th dose independent rect. 9 1
679 148.07 precipitation 0.1 270 < th dose dependent rect. 9 1
682 148.10 wind 9.0 270 < th dose independent rect. 9 1
691 148.16 humidity 50.0 90 > th dose independent rect. 8 6
730 148.36 atmosphere 1015.0 90 < th dose independent rect. 8 19
731 148.36 temperature 15.0 270 > th dose independent rect. 11 20
753 148.42 wind 9.0 10 < th dose independent rect. 9 6
770 148.53 wind 9.0 10 < th dose independent rect. 15 18
781 148.59 radiation 1.0 270 > th dose independent rect. 6 7
814 148.70 radiation 40.0 10 < th dose independent rect. 15 18
824 148.77 temperature 10.0 1440 > th dose independent rect. 10 6
831 148.77 temperature 10.0 1440 > th dose independent rect. 16 18
871 148.97 temperature 10.0 10 > th dose dependent rect. 9 5
891 149.03 wind 1.0 270 > th dose independent rect. 9 1
905 149.05 radiation 40.0 90 < th dose independent rect. 3 16
912 149.11 radiation 40.0 10 < th dose independent rect. 12 21
932 149.19 atmosphere 1005.0 90 > th dose independent rect. 3 5
954 149.25 radiation 40.0 90 < th dose dependent rect. 15 17
970 149.35 radiation 1.0 270 > th dose independent rect. 9 1
983 149.44 radiation 10.0 270 < th dose independent rect. 18 8
988 149.45 radiation 10.0 270 < th dose dependent rect. 18 8
993 149.48 temperature 15.0 270 > th dose independent rect. 2 16
997 149.52 radiation 1.0 270 < th dose dependent rect. 3 14
1000 149.54 atmosphere 1015.0 270 < th dose dependent rect. 3 2