Os07g0602100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0602100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.72 | 0.277 | 12.4 | -1.63 | 0.671 | -0.72 | 0.114 | 1.56 | -0.812 | 9.06 | 93.89 | 314 | -- | -- |
| 36.1 | 0.28 | 12.4 | -1.59 | 0.724 | -0.591 | 0.395 | -- | -0.835 | 8.97 | 92.13 | 439 | -- | -- |
| 34.27 | 0.273 | 12.4 | -1.62 | 0.654 | -0.881 | -- | 2.13 | -0.798 | 9.16 | 94.7 | 295 | -- | -- |
| 36.24 | 0.28 | 12.4 | -1.6 | 0.661 | -1.01 | -- | -- | -0.794 | 9.19 | 94.77 | 303 | -- | -- |
| 56.65 | 0.351 | 12.4 | -1.63 | -- | -0.423 | -- | 2.99 | -0.774 | -- | 94.76 | 194 | -- | -- |
| 40.16 | 0.297 | 12.4 | -1.62 | 0.594 | -- | 0.259 | -- | -0.752 | 9.61 | -- | -- | -- | -- |
| 40.41 | 0.298 | 12.4 | -1.61 | 0.592 | -- | -- | -- | -0.751 | 9.62 | -- | -- | -- | -- |
| 59.15 | 0.358 | 12.4 | -1.63 | -- | -0.761 | -- | -- | -0.756 | -- | 95 | 67 | -- | -- |
| 100.69 | 0.467 | 12.4 | -- | 0.797 | -0.725 | -- | -- | -0.679 | 8.66 | 90.03 | 413 | -- | -- |
| 61.17 | 0.365 | 12.4 | -1.62 | -- | -- | -- | -- | -0.75 | -- | -- | -- | -- | -- |
| 109.01 | 0.488 | 12.3 | -- | 0.596 | -- | -- | -- | -0.572 | 9.83 | -- | -- | -- | -- |
| 122.95 | 0.518 | 12.4 | -- | -- | -0.358 | -- | -- | -0.633 | -- | 81.98 | 2988 | -- | -- |
| 130.24 | 0.533 | 12.4 | -- | -- | -- | -- | -- | -0.571 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.84 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 2 | 32.84 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 3 | 33.71 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 4 | 33.72 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 5 | 34.02 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 4 |
| 6 | 34.02 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 4 |
| 7 | 34.05 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 13 | 2 |
| 9 | 34.05 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 2 |
| 13 | 34.08 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 13 | 2 |
| 14 | 34.08 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 4 |
| 15 | 34.08 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 6 |
| 22 | 34.18 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 45 | 34.49 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 6 | 1 |
| 52 | 34.55 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 24 | 4 |
| 58 | 34.58 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 24 | 4 |
| 72 | 34.67 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 76 | 34.73 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 22 | 3 |
| 80 | 34.79 | wind | 1.0 | 14400 | > th | dose independent | rect. | 24 | 2 |
| 81 | 34.81 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 23 | 1 |
| 86 | 34.87 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 20 | 5 |
| 91 | 34.96 | wind | 3.0 | 4320 | < th | dose dependent | rect. | 4 | 3 |
| 92 | 34.96 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 24 | 9 |
| 95 | 34.99 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 6 |
| 96 | 35.00 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 24 | 10 |
| 98 | 35.01 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 101 | 35.01 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 24 | 8 |
| 110 | 35.05 | wind | 1.0 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 112 | 35.05 | wind | 5.0 | 4320 | < th | dose dependent | rect. | 4 | 5 |
| 119 | 35.07 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 121 | 35.08 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 23 | 2 |
| 139 | 35.13 | wind | 1.0 | 14400 | < th | dose independent | rect. | 24 | 2 |
| 153 | 35.17 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 7 | 2 |
| 159 | 35.18 | humidity | 90.0 | 720 | > th | dose independent | rect. | 20 | 6 |
| 167 | 35.19 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 7 | 2 |
| 186 | 35.21 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 219 | 35.26 | wind | 9.0 | 1440 | < th | dose dependent | rect. | 6 | 1 |
| 227 | 35.27 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 228 | 35.27 | wind | 3.0 | 14400 | > th | dose independent | rect. | 7 | 2 |
| 282 | 35.33 | wind | 1.0 | 14400 | > th | dose independent | rect. | 23 | 8 |
| 287 | 35.33 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 8 |
| 316 | 35.36 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 351 | 35.39 | wind | 3.0 | 14400 | < th | dose independent | rect. | 4 | 5 |
| 371 | 35.41 | wind | 3.0 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 386 | 35.42 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 8 |
| 431 | 35.45 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 8 | 18 |
| 432 | 35.46 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 503 | 35.52 | precipitation | 0.1 | 270 | > th | dose independent | sin | 10 | NA |
| 505 | 35.52 | wind | 1.0 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 549 | 35.56 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 20 | 1 |
| 565 | 35.57 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 601 | 35.59 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 611 | 35.59 | wind | 5.0 | 14400 | < th | dose dependent | sin | 8 | NA |
| 688 | 35.63 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 12 | 7 |
| 713 | 35.65 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 718 | 35.65 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 4 |
| 777 | 35.69 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 19 | 13 |
| 781 | 35.69 | humidity | 90.0 | 720 | > th | dose dependent | sin | 15 | NA |
| 827 | 35.72 | wind | 1.0 | 1440 | > th | dose independent | rect. | 23 | 2 |
| 842 | 35.73 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 873 | 35.74 | wind | 1.0 | 14400 | > th | dose dependent | sin | 9 | NA |
| 913 | 35.76 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 958 | 35.78 | precipitation | 0.1 | 270 | > th | dose dependent | sin | 9 | NA |
| 970 | 35.78 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 11 |
| 972 | 35.78 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 13 |
| 978 | 35.79 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 6 | 1 |