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Os07g0601100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to NADPH HC toxin reductase (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.99 (0.0296) R2 : 0.817
β1 : 2.76 (0.111) R2dD : 0.27 R2D : 0.176
β2 : 2.51 (0.0755) R2dC : 0.473 R2C : 0.541
β3 : -1.25 (0.0945) R2dE : 0.0796 R2E : 0.0724
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.279 (0.0632) R2dN8 : 0.0124 R2N8 : -0.0106
σ : 0.552
deviance : 140.35
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_____
C
peak time of C : 8.56
E
wheather : temperature
threshold : 25.9
memory length : 1103
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
143.9 0.564 9.11 2.01 2.69 -0.571 0.21 -3.74 0.0496 8.61 29.84 1312 -- --
146.59 0.564 8.95 2.62 2.8 -0.928 0.393 -- 0.348 8.61 26.19 2663 -- --
143.5 0.558 9.01 2.31 2.7 -0.882 -- -1.43 0.134 8.68 28.08 1296 -- --
140.35 0.552 8.99 2.76 2.51 -1.25 -- -- 0.279 8.56 25.9 1103 -- --
337.46 0.856 8.91 3.53 -- -3.42 -- 2.72 0.779 -- 24.43 736 -- --
193.46 0.652 8.98 2.4 2.71 -- 0.314 -- 0.25 8.8 -- -- -- --
193.79 0.652 8.98 2.41 2.71 -- -- -- 0.25 8.8 -- -- -- --
347.91 0.869 8.99 3.08 -- -3.06 -- -- 0.566 -- 24.4 722 -- --
327.43 0.843 9.07 -- 2.7 -0.641 -- -- -0.116 8.55 28.17 1215 -- --
612.49 1.16 9.06 2.41 -- -- -- -- 0.27 -- -- -- -- --
346.52 0.871 9.04 -- 2.72 -- -- -- -0.0185 8.73 -- -- -- --
585.15 1.13 9.08 -- -- -2.47 -- -- 0.164 -- 24.6 690 -- --
765.71 1.29 9.12 -- -- -- -- -- 0.00299 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 133.98 temperature 25 720 > th dose dependent rect. 16 18
6 137.08 humidity 70 14400 < th dose dependent rect. 18 1
8 137.35 temperature 20 270 > th dose dependent rect. 15 13
9 137.39 humidity 70 14400 < th dose independent rect. 19 13
11 137.60 radiation 1 720 > th dose independent rect. 16 14
12 137.66 humidity 70 14400 < th dose dependent rect. 18 4
23 137.68 temperature 10 270 > th dose dependent rect. 15 13
26 137.80 radiation 1 720 > th dose independent rect. 16 20
36 138.71 temperature 20 720 > th dose dependent rect. 16 3
37 138.72 humidity 70 14400 < th dose independent rect. 19 2
65 139.43 temperature 25 720 > th dose dependent sin 11 NA
71 139.68 humidity 60 14400 < th dose dependent rect. 16 4
98 139.94 humidity 70 14400 > th dose independent rect. 19 13
105 140.27 wind 5 43200 < th dose independent rect. 6 1
111 140.49 wind 5 43200 > th dose independent rect. 6 1
117 140.65 humidity 70 14400 > th dose independent rect. 19 8
122 140.69 humidity 70 14400 > th dose independent rect. 19 6
124 140.73 wind 3 43200 > th dose dependent rect. 5 2
126 140.77 humidity 70 14400 > th dose independent rect. 19 2
128 140.80 humidity 70 14400 > th dose independent rect. 19 4
159 140.89 temperature 20 10 > th dose dependent rect. 16 14
161 140.90 humidity 50 14400 > th dose independent rect. 17 10
165 140.95 humidity 50 14400 > th dose independent rect. 16 18
181 141.04 humidity 50 14400 > th dose independent rect. 17 8
182 141.05 humidity 50 14400 > th dose independent rect. 17 2
187 141.08 radiation 20 1440 < th dose independent rect. 16 1
190 141.15 radiation 20 1440 > th dose independent rect. 16 15
204 141.40 humidity 50 14400 > th dose independent rect. 17 15
206 141.47 radiation 20 1440 < th dose independent rect. 16 11
207 141.48 temperature 25 720 > th dose dependent rect. 16 7
209 141.51 humidity 50 14400 > th dose independent rect. 17 6
214 141.55 radiation 20 1440 < th dose independent rect. 16 15
217 141.57 radiation 20 1440 > th dose independent rect. 16 1
231 141.58 humidity 50 14400 < th dose independent rect. 16 18
242 141.64 radiation 20 1440 < th dose independent rect. 16 9
253 141.68 temperature 25 1440 > th dose dependent rect. 7 3
302 142.01 radiation 20 1440 < th dose independent rect. 16 7
319 142.23 wind 3 43200 > th dose dependent rect. 3 11
327 142.34 wind 7 43200 < th dose dependent rect. 3 9
335 142.45 humidity 80 14400 > th dose dependent rect. 21 2
339 142.49 wind 3 43200 > th dose dependent sin 5 NA
345 142.51 humidity 50 14400 < th dose independent rect. 16 2
398 142.85 wind 5 43200 < th dose independent sin 4 NA
423 143.03 wind 5 43200 > th dose independent sin 4 NA
424 143.03 temperature 10 720 > th dose dependent rect. 7 13
478 143.32 wind 9 43200 < th dose dependent rect. 3 4
482 143.33 temperature 25 1440 > th dose dependent rect. 20 16
493 143.42 wind 5 43200 < th dose independent rect. 3 12
501 143.46 wind 5 43200 > th dose independent rect. 3 12
530 143.60 wind 5 43200 > th dose independent rect. 9 1
536 143.63 wind 5 43200 < th dose independent rect. 9 1
542 143.65 radiation 1 43200 < th dose dependent rect. 19 3
562 143.74 radiation 20 4320 > th dose dependent rect. 16 16
563 143.75 wind 5 43200 < th dose independent rect. 17 20
582 143.82 wind 5 43200 > th dose independent rect. 17 21
615 144.02 wind 5 43200 < th dose independent rect. 5 7
641 144.15 temperature 25 1440 > th dose dependent sin 7 NA
654 144.20 temperature 25 720 > th dose independent rect. 16 3
660 144.21 wind 3 43200 > th dose independent rect. 3 8
693 144.30 wind 5 43200 > th dose independent rect. 5 7
694 144.31 wind 5 43200 > th dose independent rect. 20 20
709 144.36 wind 5 43200 < th dose independent rect. 20 20
745 144.44 radiation 1 720 > th dose independent rect. 7 23
755 144.46 wind 5 43200 > th dose dependent rect. 17 21
791 144.55 radiation 20 4320 < th dose independent rect. 22 10
792 144.55 temperature 30 1440 > th dose independent rect. 17 21
804 144.59 radiation 20 4320 < th dose independent rect. 24 8
808 144.60 radiation 20 4320 < th dose independent rect. 5 3
839 144.65 radiation 20 4320 < th dose independent rect. 2 6
847 144.66 temperature 30 1440 > th dose dependent rect. 13 6
867 144.68 temperature 30 1440 < th dose independent rect. 18 20
873 144.68 temperature 10 720 > th dose dependent rect. 7 18
880 144.69 humidity 50 14400 > th dose dependent rect. 18 1
912 144.77 temperature 25 270 > th dose independent rect. 14 7
941 144.82 radiation 1 720 < th dose independent rect. 5 19
954 144.84 radiation 1 43200 < th dose dependent rect. 19 5
961 144.85 radiation 30 1440 < th dose dependent rect. 16 15