Os07g0600700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : X8 domain containing protein.
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Os07g0600700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : X8 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 175.58 | 0.623 | 9.75 | -2.17 | 1.03 | 2.12 | 0.387 | -1 | -0.797 | 8.23 | 75.5 | 1317 | -- | -- |
| 176.65 | 0.619 | 9.74 | -2.06 | 1.05 | 2.1 | 0.374 | -- | -0.775 | 8.32 | 75.91 | 1303 | -- | -- |
| 175.91 | 0.618 | 9.75 | -2.16 | 1.03 | 2.14 | -- | -1.01 | -0.798 | 8.35 | 75.04 | 1308 | -- | -- |
| 177.02 | 0.62 | 9.73 | -2.05 | 1.05 | 2.11 | -- | -- | -0.764 | 8.45 | 75.56 | 1292 | -- | -- |
| 231.13 | 0.708 | 9.77 | -2.12 | -- | 2.09 | -- | -1.01 | -0.78 | -- | 75 | 1373 | -- | -- |
| 252.75 | 0.745 | 9.69 | -1.83 | 1.05 | -- | 0.634 | -- | -0.587 | 7.35 | -- | -- | -- | -- |
| 253.77 | 0.746 | 9.7 | -1.81 | 1.05 | -- | -- | -- | -0.587 | 7.47 | -- | -- | -- | -- |
| 232.59 | 0.71 | 9.76 | -2.03 | -- | 2.06 | -- | -- | -0.757 | -- | 75 | 1373 | -- | -- |
| 269.6 | 0.765 | 9.68 | -- | 1 | 2.17 | -- | -- | -0.523 | 8.55 | 83.18 | 1307 | -- | -- |
| 312.2 | 0.826 | 9.72 | -1.8 | -- | -- | -- | -- | -0.571 | -- | -- | -- | -- | -- |
| 340.49 | 0.863 | 9.65 | -- | 1.03 | -- | -- | -- | -0.385 | 7.59 | -- | -- | -- | -- |
| 320.63 | 0.834 | 9.71 | -- | -- | 2.34 | -- | -- | -0.526 | -- | 83.97 | 1417 | -- | -- |
| 397.46 | 0.931 | 9.67 | -- | -- | -- | -- | -- | -0.371 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 166.11 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 9 |
| 3 | 166.73 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 9 |
| 17 | 167.99 | humidity | 80 | 1440 | < th | dose independent | sin | 1 | NA |
| 25 | 168.35 | humidity | 80 | 1440 | > th | dose independent | sin | 1 | NA |
| 31 | 168.51 | humidity | 80 | 720 | > th | dose dependent | rect. | 8 | 15 |
| 33 | 168.56 | humidity | 70 | 1440 | > th | dose dependent | rect. | 10 | 4 |
| 50 | 169.35 | humidity | 80 | 1440 | < th | dose independent | rect. | 10 | 4 |
| 71 | 170.31 | humidity | 80 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 77 | 170.54 | humidity | 70 | 1440 | > th | dose dependent | rect. | 9 | 6 |
| 151 | 172.98 | humidity | 70 | 720 | > th | dose dependent | sin | 19 | NA |
| 209 | 174.82 | humidity | 80 | 720 | > th | dose independent | rect. | 9 | 13 |
| 230 | 175.22 | humidity | 70 | 1440 | > th | dose dependent | sin | 0 | NA |
| 319 | 177.17 | humidity | 60 | 720 | > th | dose dependent | rect. | 15 | 10 |
| 358 | 177.94 | humidity | 80 | 720 | > th | dose independent | sin | 20 | NA |
| 663 | 181.41 | humidity | 70 | 720 | > th | dose dependent | rect. | 17 | 4 |
| 665 | 181.42 | radiation | 1 | 720 | < th | dose dependent | rect. | 6 | 20 |
| 862 | 182.66 | humidity | 70 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 976 | 183.38 | humidity | 70 | 720 | > th | dose dependent | no | NA | NA |