Os07g0600100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
FiT-DB / Search/ Help/ Sample detail
|
Os07g0600100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description :
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 59.06 | 0.361 | 10.5 | 1.97 | 1.47 | -1.25 | -0.524 | 0.623 | 0.559 | 22.2 | 15.3 | 8 | -- | -- |
| 59.14 | 0.361 | 10.5 | 1.88 | 1.46 | -1.26 | -0.643 | -- | 0.533 | 22.2 | 15.2 | 10 | -- | -- |
| 59.77 | 0.363 | 10.5 | 2.05 | 1.47 | -1.28 | -- | 1.08 | 0.577 | 22.2 | 15.12 | 6 | -- | -- |
| 60.76 | 0.365 | 10.5 | 1.9 | 1.47 | -1.3 | -- | -- | 0.536 | 22.2 | 14.5 | 7 | -- | -- |
| 176.57 | 0.619 | 10.4 | 2.27 | -- | -2.27 | -- | 1.27 | 0.716 | -- | 10.44 | 2 | -- | -- |
| 75.26 | 0.407 | 10.6 | 1.63 | 1.67 | -- | -0.59 | -- | 0.353 | 22.9 | -- | -- | -- | -- |
| 76.73 | 0.41 | 10.6 | 1.66 | 1.67 | -- | -- | -- | 0.355 | 22.9 | -- | -- | -- | -- |
| 177.92 | 0.621 | 10.4 | 2.1 | -- | -2.25 | -- | -- | 0.667 | -- | 10.55 | 2 | -- | -- |
| 147.43 | 0.569 | 10.6 | -- | 1.62 | -0.38 | -- | -- | 0.215 | 22.8 | 14.5 | 7 | -- | -- |
| 250.58 | 0.74 | 10.5 | 1.69 | -- | -- | -- | -- | 0.367 | -- | -- | -- | -- | -- |
| 148.93 | 0.571 | 10.6 | -- | 1.69 | -- | -- | -- | 0.171 | 23 | -- | -- | -- | -- |
| 284.6 | 0.788 | 10.5 | -- | -- | -1.34 | -- | -- | 0.363 | -- | 19.6 | 2 | -- | -- |
| 326.04 | 0.843 | 10.6 | -- | -- | -- | -- | -- | 0.179 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 56.62 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 20 | 20 |
| 3 | 57.13 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 6 | 57.91 | temperature | 15.0 | 10 | > th | dose dependent | sin | 4 | NA |
| 17 | 58.25 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 2 | 18 |
| 21 | 58.39 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 23 | 22 |
| 34 | 58.68 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 24 | 20 |
| 36 | 58.74 | temperature | 30.0 | 10 | < th | dose dependent | sin | 4 | NA |
| 46 | 58.92 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 47 | 58.93 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 5 | 22 |
| 55 | 59.10 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 18 |
| 60 | 59.14 | temperature | 15.0 | 10 | > th | dose dependent | no | NA | NA |
| 86 | 59.27 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 91 | 59.33 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 18 |
| 102 | 59.46 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 104 | 59.48 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 7 | 19 |
| 107 | 59.49 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 4 | 23 |
| 108 | 59.49 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 113 | 59.56 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 128 | 59.69 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 140 | 59.81 | temperature | 30.0 | 10 | < th | dose dependent | no | NA | NA |
| 145 | 59.81 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 162 | 59.90 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 175 | 60.00 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 19 | 16 |
| 184 | 60.04 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 197 | 60.14 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 225 | 60.29 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 9 | 17 |
| 231 | 60.33 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 286 | 60.63 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 9 | 15 |
| 310 | 60.73 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 325 | 60.81 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 349 | 60.91 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 420 | 61.21 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 430 | 61.26 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 20 | 7 |
| 459 | 61.41 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 5 | 11 |
| 506 | 61.55 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 521 | 61.61 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 2 |
| 567 | 61.78 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 579 | 61.83 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 594 | 61.90 | radiation | 20.0 | 10 | < th | dose dependent | no | NA | NA |
| 611 | 61.93 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 690 | 62.19 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 691 | 62.19 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 692 | 62.19 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 2 |
| 722 | 62.32 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 736 | 62.39 | wind | 9.0 | 14400 | > th | dose independent | sin | 5 | NA |
| 754 | 62.43 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 766 | 62.47 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 775 | 62.48 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 778 | 62.49 | wind | 9.0 | 14400 | > th | dose dependent | sin | 5 | NA |
| 780 | 62.50 | wind | 9.0 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 786 | 62.51 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 22 | 17 |
| 800 | 62.54 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 18 | 2 |
| 801 | 62.54 | radiation | 1.0 | 4320 | > th | dose dependent | rect. | 18 | 12 |
| 811 | 62.56 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 17 | 14 |
| 812 | 62.56 | radiation | 1.0 | 4320 | > th | dose dependent | rect. | 4 | 2 |
| 827 | 62.57 | wind | 9.0 | 14400 | > th | dose independent | rect. | 21 | 20 |
| 834 | 62.58 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 21 | 20 |
| 855 | 62.63 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 18 | 13 |
| 857 | 62.63 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 10 | 1 |
| 880 | 62.68 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 898 | 62.71 | wind | 9.0 | 14400 | > th | dose independent | rect. | 22 | 16 |
| 909 | 62.73 | radiation | 20.0 | 10 | < th | dose dependent | sin | 1 | NA |
| 925 | 62.75 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 978 | 62.86 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 986 | 62.87 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 7 | 9 |
| 988 | 62.88 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 18 | 4 |