Os07g0599900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0599900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 602.3 | 1.15 | 4.03 | 1.45 | 1.05 | -2.3 | 1.07 | 14.5 | 1.17 | 22.9 | 52.44 | 5094 | -- | -- |
| 744.42 | 1.28 | 4.26 | 1.75 | 0.989 | -0.447 | 1.87 | -- | 1.2 | 21.8 | 87 | 2 | -- | -- |
| 606.86 | 1.15 | 4.03 | 1.38 | 1.05 | -2.17 | -- | 14.3 | 1.18 | 23 | 52.74 | 5090 | -- | -- |
| 743.56 | 1.27 | 4.16 | 1.59 | 1.18 | 0.618 | -- | -- | 1.22 | 22 | 46.06 | 594 | -- | -- |
| 674.17 | 1.21 | 4.02 | 1.3 | -- | -1.47 | -- | 13 | 1.21 | -- | 52.61 | 5092 | -- | -- |
| 746.74 | 1.28 | 4.26 | 1.73 | 1.11 | -- | 1.7 | -- | 1.21 | 22.5 | -- | -- | -- | -- |
| 758.08 | 1.29 | 4.26 | 1.66 | 1.1 | -- | -- | -- | 1.2 | 22.8 | -- | -- | -- | -- |
| 741.58 | 1.27 | 4.19 | 1.38 | -- | 3.76 | -- | -- | 1.34 | -- | 45.74 | 600 | -- | -- |
| 775.85 | 1.3 | 4.23 | -- | 1.17 | 1.64 | -- | -- | 1.21 | 21.5 | 47.07 | 617 | -- | -- |
| 832.71 | 1.35 | 4.24 | 1.69 | -- | -- | -- | -- | 1.2 | -- | -- | -- | -- | -- |
| 831.01 | 1.35 | 4.31 | -- | 1.11 | -- | -- | -- | 1.01 | 22.9 | -- | -- | -- | -- |
| 780.48 | 1.3 | 4.26 | -- | -- | 4.4 | -- | -- | 1.12 | -- | 45.89 | 602 | -- | -- |
| 907.68 | 1.41 | 4.28 | -- | -- | -- | -- | -- | 1.02 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 586.71 | humidity | 70 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 11 | 588.89 | wind | 1 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 12 | 589.06 | wind | 1 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 13 | 589.93 | humidity | 70 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 24 | 591.53 | wind | 1 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 40 | 598.17 | wind | 1 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 44 | 598.88 | wind | 1 | 14400 | < th | dose dependent | rect. | 6 | 7 |
| 72 | 602.63 | humidity | 60 | 14400 | < th | dose dependent | rect. | 10 | 1 |
| 83 | 604.33 | humidity | 50 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 88 | 604.98 | wind | 1 | 14400 | < th | dose independent | rect. | 5 | 8 |
| 100 | 606.19 | humidity | 50 | 14400 | > th | dose independent | rect. | 11 | 4 |
| 102 | 606.24 | humidity | 60 | 14400 | < th | dose independent | rect. | 20 | 15 |
| 105 | 606.29 | humidity | 60 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 131 | 606.75 | humidity | 50 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 147 | 607.87 | wind | 1 | 14400 | > th | dose independent | rect. | 5 | 8 |
| 148 | 607.93 | humidity | 50 | 14400 | > th | dose independent | rect. | 2 | 13 |
| 150 | 607.94 | humidity | 50 | 14400 | > th | dose independent | rect. | 20 | 19 |
| 152 | 607.95 | humidity | 50 | 14400 | > th | dose independent | rect. | 6 | 9 |
| 153 | 607.96 | humidity | 50 | 14400 | > th | dose independent | rect. | 4 | 11 |
| 154 | 607.96 | humidity | 50 | 14400 | > th | dose independent | rect. | 22 | 17 |
| 171 | 608.77 | humidity | 60 | 14400 | < th | dose dependent | rect. | 20 | 16 |
| 174 | 608.83 | humidity | 60 | 14400 | < th | dose dependent | rect. | 6 | 6 |
| 201 | 609.10 | humidity | 60 | 14400 | > th | dose independent | rect. | 20 | 13 |
| 235 | 610.29 | wind | 1 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 243 | 610.56 | humidity | 50 | 14400 | < th | dose independent | rect. | 17 | 22 |
| 247 | 610.65 | humidity | 50 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 267 | 610.95 | humidity | 50 | 14400 | > th | dose independent | sin | 5 | NA |
| 268 | 610.95 | humidity | 60 | 14400 | > th | dose independent | rect. | 2 | 7 |
| 285 | 611.11 | wind | 1 | 14400 | < th | dose dependent | rect. | 1 | 12 |
| 286 | 611.12 | humidity | 60 | 14400 | > th | dose independent | rect. | 6 | 3 |
| 303 | 611.31 | humidity | 60 | 14400 | > th | dose independent | rect. | 4 | 5 |
| 359 | 612.62 | wind | 1 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 426 | 614.01 | humidity | 50 | 14400 | < th | dose independent | sin | 5 | NA |
| 431 | 614.14 | wind | 1 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 468 | 614.58 | humidity | 50 | 4320 | > th | dose independent | rect. | 12 | 23 |
| 510 | 614.96 | humidity | 60 | 14400 | < th | dose dependent | sin | 7 | NA |
| 514 | 615.01 | humidity | 50 | 4320 | > th | dose independent | rect. | 11 | 9 |
| 535 | 615.14 | humidity | 50 | 4320 | > th | dose independent | rect. | 11 | 17 |
| 540 | 615.18 | humidity | 50 | 4320 | > th | dose independent | rect. | 11 | 11 |
| 558 | 615.45 | humidity | 50 | 4320 | > th | dose independent | sin | 20 | NA |
| 581 | 615.68 | humidity | 50 | 4320 | > th | dose independent | rect. | 1 | 19 |
| 591 | 615.85 | humidity | 50 | 4320 | > th | dose independent | rect. | 21 | 23 |
| 600 | 615.90 | humidity | 50 | 4320 | > th | dose independent | rect. | 5 | 15 |
| 653 | 616.03 | humidity | 50 | 4320 | > th | dose independent | rect. | 5 | 23 |
| 655 | 616.04 | humidity | 50 | 4320 | > th | dose independent | no | NA | NA |
| 701 | 616.14 | humidity | 50 | 4320 | > th | dose independent | rect. | 8 | 23 |
| 874 | 616.87 | humidity | 50 | 4320 | < th | dose independent | sin | 22 | NA |
| 931 | 617.17 | humidity | 50 | 4320 | < th | dose independent | no | NA | NA |