Os07g0599500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0599500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 466.54 | 1.01 | 4.09 | 1.51 | 0.346 | 1.89 | 0.505 | 4.38 | 0.857 | 1.8 | 1012 | 13248 | -- | -- |
| 541.42 | 1.08 | 3.95 | 2.84 | 0.347 | 1.84 | 0.385 | -- | 1.04 | 2.97 | 1008 | 10690 | -- | -- |
| 467.34 | 1.01 | 4.09 | 1.49 | 0.356 | 1.89 | -- | 4.41 | 0.851 | 2.44 | 1012 | 13262 | -- | -- |
| 530.46 | 1.07 | 3.91 | 3.12 | 0.341 | 1.98 | -- | -- | 1.2 | 2.86 | 1013 | 10987 | -- | -- |
| 474.81 | 1.01 | 4.09 | 1.51 | -- | 1.88 | -- | 4.36 | 0.861 | -- | 1012 | 13258 | -- | -- |
| 684.71 | 1.23 | 4.02 | 2.22 | 0.29 | -- | 0.517 | -- | 0.687 | 1.4 | -- | -- | -- | -- |
| 685.5 | 1.23 | 4.02 | 2.2 | 0.304 | -- | -- | -- | 0.683 | 2.36 | -- | -- | -- | -- |
| 536.62 | 1.08 | 3.9 | 3.15 | -- | 2 | -- | -- | 1.22 | -- | 1013 | 10927 | -- | -- |
| 755.57 | 1.28 | 4.01 | -- | 0.357 | 1.15 | -- | -- | 0.695 | 2.31 | 1013 | 10558 | -- | -- |
| 690.96 | 1.23 | 4.02 | 2.22 | -- | -- | -- | -- | 0.69 | -- | -- | -- | -- | -- |
| 813.48 | 1.33 | 4.08 | -- | 0.346 | -- | -- | -- | 0.437 | 2.47 | -- | -- | -- | -- |
| 754.56 | 1.28 | 4.01 | -- | -- | 1.28 | -- | -- | 0.704 | -- | 1007 | 10971 | -- | -- |
| 820.54 | 1.34 | 4.07 | -- | -- | -- | -- | -- | 0.444 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 437.96 | wind | 1 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 2 | 438.01 | wind | 1 | 14400 | > th | dose independent | rect. | 6 | 3 |
| 3 | 438.33 | wind | 3 | 14400 | < th | dose dependent | rect. | 6 | 2 |
| 4 | 438.82 | wind | 1 | 14400 | < th | dose dependent | rect. | 5 | 8 |
| 6 | 439.17 | wind | 1 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 12 | 442.42 | wind | 1 | 14400 | < th | dose independent | rect. | 6 | 7 |
| 22 | 444.91 | wind | 1 | 14400 | > th | dose independent | rect. | 6 | 7 |
| 23 | 445.40 | humidity | 50 | 14400 | < th | dose dependent | rect. | 11 | 2 |
| 24 | 446.41 | humidity | 50 | 14400 | < th | dose independent | rect. | 11 | 2 |
| 28 | 446.84 | humidity | 60 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 30 | 447.30 | humidity | 50 | 14400 | < th | dose independent | rect. | 11 | 4 |
| 40 | 448.48 | humidity | 50 | 14400 | > th | dose independent | rect. | 11 | 4 |
| 41 | 448.54 | humidity | 50 | 14400 | < th | dose independent | rect. | 13 | 2 |
| 72 | 449.65 | humidity | 50 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 73 | 449.66 | humidity | 50 | 14400 | > th | dose independent | rect. | 4 | 11 |
| 74 | 449.66 | humidity | 50 | 14400 | > th | dose independent | rect. | 2 | 13 |
| 78 | 449.68 | humidity | 50 | 14400 | > th | dose independent | rect. | 6 | 9 |
| 81 | 449.69 | humidity | 50 | 14400 | > th | dose independent | rect. | 20 | 19 |
| 85 | 449.72 | humidity | 50 | 14400 | > th | dose independent | rect. | 22 | 17 |
| 93 | 450.11 | humidity | 50 | 14400 | < th | dose dependent | rect. | 8 | 5 |
| 219 | 453.18 | humidity | 50 | 14400 | < th | dose dependent | sin | 7 | NA |
| 222 | 453.36 | wind | 1 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 227 | 453.59 | humidity | 50 | 14400 | > th | dose independent | sin | 7 | NA |
| 243 | 453.88 | humidity | 60 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 248 | 454.12 | humidity | 50 | 14400 | < th | dose independent | sin | 7 | NA |
| 278 | 455.45 | wind | 1 | 14400 | < th | dose dependent | rect. | 21 | 16 |
| 333 | 456.89 | wind | 1 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 349 | 458.34 | humidity | 50 | 14400 | < th | dose dependent | rect. | 11 | 22 |
| 434 | 460.81 | humidity | 50 | 14400 | < th | dose dependent | no | NA | NA |
| 579 | 461.95 | humidity | 60 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 587 | 462.39 | wind | 1 | 14400 | < th | dose dependent | sin | 5 | NA |
| 629 | 463.88 | wind | 1 | 14400 | < th | dose dependent | rect. | 11 | 2 |
| 650 | 465.48 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 651 | 465.49 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 653 | 465.57 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 20 | 4 |
| 663 | 465.93 | wind | 1 | 14400 | < th | dose independent | rect. | 11 | 2 |
| 695 | 467.06 | wind | 1 | 14400 | > th | dose independent | rect. | 11 | 2 |
| 707 | 467.72 | atmosphere | 1010 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 728 | 468.10 | humidity | 60 | 14400 | > th | dose independent | rect. | 4 | 5 |
| 729 | 468.10 | humidity | 60 | 14400 | > th | dose independent | rect. | 2 | 7 |
| 735 | 468.26 | humidity | 60 | 14400 | > th | dose independent | rect. | 20 | 13 |
| 737 | 468.33 | humidity | 60 | 14400 | > th | dose independent | rect. | 6 | 3 |
| 746 | 468.58 | humidity | 60 | 14400 | > th | dose independent | rect. | 22 | 11 |
| 759 | 469.00 | atmosphere | 1010 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 767 | 469.52 | atmosphere | 1010 | 14400 | > th | dose dependent | rect. | 10 | 8 |
| 792 | 470.06 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 15 | 7 |
| 797 | 470.16 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 799 | 470.17 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 17 | 4 |
| 801 | 470.24 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 14 | 10 |
| 804 | 470.29 | wind | 1 | 14400 | < th | dose dependent | rect. | 5 | 21 |
| 840 | 470.54 | atmosphere | 1015 | 14400 | > th | dose independent | rect. | 14 | 10 |