Os07g0596200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0596200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 82.42 | 0.427 | 6.87 | 0.139 | 1.34 | 0.93 | 0.522 | 0.634 | 0.184 | 19.9 | 20.51 | 1452 | -- | -- |
| 83.44 | 0.425 | 6.89 | 0.0421 | 1.35 | 0.887 | 0.404 | -- | 0.159 | 19.9 | 20.59 | 1585 | -- | -- |
| 83.22 | 0.425 | 6.87 | 0.123 | 1.34 | 0.93 | -- | 0.619 | 0.182 | 19.9 | 20.53 | 1448 | -- | -- |
| 83.97 | 0.427 | 6.89 | 0.00656 | 1.34 | 0.858 | -- | -- | 0.158 | 19.9 | 20.54 | 1467 | -- | -- |
| 160.3 | 0.59 | 6.85 | 0.162 | -- | 1 | -- | 0.617 | 0.108 | -- | 21.4 | 660 | -- | -- |
| 98.89 | 0.466 | 6.84 | 0.378 | 1.34 | -- | 0.63 | -- | 0.352 | 20 | -- | -- | -- | -- |
| 100.07 | 0.468 | 6.84 | 0.361 | 1.34 | -- | -- | -- | 0.352 | 20 | -- | -- | -- | -- |
| 138.59 | 0.548 | 6.85 | 0.0646 | -- | 1.06 | -- | -- | 0.0101 | -- | 25.2 | 566 | -- | -- |
| 83.97 | 0.427 | 6.89 | -- | 1.34 | 0.859 | -- | -- | 0.158 | 19.9 | 20.54 | 1471 | -- | -- |
| 197.54 | 0.657 | 6.81 | 0.347 | -- | -- | -- | -- | 0.335 | -- | -- | -- | -- | -- |
| 103.5 | 0.476 | 6.85 | -- | 1.33 | -- | -- | -- | 0.312 | 20 | -- | -- | -- | -- |
| 137.69 | 0.547 | 6.91 | -- | -- | 1.09 | -- | -- | -0.0628 | -- | 25.2 | 570 | -- | -- |
| 200.72 | 0.661 | 6.82 | -- | -- | -- | -- | -- | 0.297 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 81.48 | temperature | 25 | 720 | < th | dose dependent | rect. | 8 | 18 |
| 6 | 81.66 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 14 |
| 11 | 81.85 | temperature | 20 | 720 | > th | dose independent | sin | 16 | NA |
| 21 | 82.06 | temperature | 20 | 720 | > th | dose independent | rect. | 6 | 19 |
| 25 | 82.10 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 5 |
| 34 | 82.21 | temperature | 20 | 720 | < th | dose independent | sin | 17 | NA |
| 36 | 82.22 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 37 | 82.22 | temperature | 20 | 720 | < th | dose independent | rect. | 8 | 18 |
| 38 | 82.22 | temperature | 25 | 720 | < th | dose dependent | sin | 21 | NA |
| 39 | 82.24 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 2 |
| 40 | 82.24 | temperature | 25 | 270 | < th | dose dependent | rect. | 12 | 22 |
| 80 | 82.49 | temperature | 25 | 270 | < th | dose dependent | rect. | 23 | 23 |
| 81 | 82.50 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 5 |
| 90 | 82.55 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 94 | 82.59 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 133 | 82.69 | temperature | 20 | 720 | < th | dose independent | rect. | 13 | 14 |
| 135 | 82.70 | temperature | 20 | 720 | < th | dose independent | rect. | 14 | 12 |
| 166 | 82.78 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 186 | 82.83 | temperature | 20 | 1440 | > th | dose independent | rect. | 9 | 19 |
| 187 | 82.83 | temperature | 20 | 270 | < th | dose independent | rect. | 12 | 21 |
| 260 | 82.97 | temperature | 20 | 720 | > th | dose independent | sin | 22 | NA |
| 303 | 83.07 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 455 | 83.34 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 18 |
| 457 | 83.34 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 20 |
| 690 | 83.63 | temperature | 20 | 1440 | > th | dose independent | rect. | 13 | 21 |
| 706 | 83.65 | temperature | 20 | 1440 | < th | dose independent | rect. | 19 | 19 |
| 717 | 83.66 | temperature | 20 | 1440 | < th | dose independent | rect. | 19 | 17 |
| 725 | 83.67 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 834 | 83.78 | temperature | 20 | 270 | > th | dose independent | rect. | 10 | 23 |
| 893 | 83.88 | temperature | 20 | 270 | < th | dose independent | rect. | 3 | 23 |
| 967 | 83.96 | temperature | 20 | 1440 | < th | dose independent | rect. | 13 | 21 |
| 987 | 83.98 | temperature | 20 | 720 | < th | dose independent | rect. | 8 | 13 |