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Os07g0594500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description :


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.64 (0.0153) R2 : 0.672
β1 : -0.969 (0.0559) R2dD : 0.225 R2D : 0.132
β2 : 0.956 (0.0398) R2dC : 0.418 R2C : 0.362
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.4 (0.0326) R2dN8 : 0.146 R2N8 : 0.0397
σ : 0.287
deviance : 37.53
__
_____
C
peak time of C : 5.45
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
34.35 0.275 9.65 -0.974 1.03 -0.284 0.324 -0.581 -0.413 4.25 8.34 10 -- --
36.08 0.28 9.64 -0.956 1.02 -0.298 0.0347 -- -0.417 4.13 8.568 8 -- --
34.59 0.274 9.65 -0.975 1.03 -0.283 -- -0.492 -0.415 4.25 8.179 9 -- --
36.03 0.28 9.64 -0.965 1.04 -0.302 -- -- -0.413 4.16 8.28 8 -- --
83.92 0.427 9.65 -0.953 -- 0.0519 -- -0.438 -0.378 -- 20 7 -- --
37.37 0.287 9.63 -0.969 0.955 -- 0.263 -- -0.399 5.5 -- -- -- --
37.53 0.287 9.64 -0.969 0.956 -- -- -- -0.4 5.45 -- -- -- --
42.01 0.302 9.62 -0.691 -- 1.01 -- -- -0.417 -- 0.01592 668 -- --
60.59 0.363 9.62 -- 1.05 -0.32 -- -- -0.314 4.19 9.93 12 -- --
85.13 0.431 9.65 -0.937 -- -- -- -- -0.377 -- -- -- -- --
62.27 0.369 9.61 -- 0.94 -- -- -- -0.292 5.5 -- -- -- --
59.08 0.358 9.62 -- -- 1.15 -- -- -0.258 -- 6.875e-07 706 -- --
108.28 0.486 9.62 -- -- -- -- -- -0.273 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 33.30 humidity 50.0 30 > th dose dependent rect. 7 6
3 33.40 radiation 40.0 90 < th dose independent rect. 7 6
14 33.59 temperature 15.0 720 > th dose independent rect. 17 14
17 33.62 temperature 15.0 30 > th dose independent rect. 21 10
26 33.69 temperature 10.0 30 > th dose dependent rect. 21 10
27 33.70 temperature 15.0 720 > th dose independent rect. 10 6
28 33.70 radiation 40.0 90 < th dose dependent rect. 7 6
32 33.74 wind 1.0 720 < th dose independent rect. 1 1
35 33.74 temperature 15.0 720 > th dose independent rect. 19 19
41 33.76 temperature 15.0 270 > th dose independent rect. 10 13
42 33.77 radiation 40.0 90 < th dose independent rect. 9 4
44 33.77 temperature 15.0 720 > th dose independent rect. 19 10
48 33.81 temperature 15.0 720 > th dose independent rect. 11 20
50 33.82 temperature 15.0 720 > th dose independent rect. 5 22
52 33.82 humidity 50.0 30 > th dose dependent rect. 7 14
57 33.85 temperature 15.0 720 > th dose independent rect. 4 18
59 33.85 temperature 15.0 270 > th dose independent rect. 9 22
61 33.86 humidity 90.0 720 < th dose independent rect. 8 16
79 33.92 temperature 15.0 720 > th dose independent rect. 17 22
86 33.95 atmosphere 1010.0 90 < th dose independent rect. 21 10
87 33.95 temperature 20.0 10 > th dose independent rect. 2 14
92 33.95 humidity 50.0 30 > th dose dependent rect. 7 12
101 33.98 temperature 15.0 720 > th dose independent sin 14 NA
127 34.07 temperature 15.0 90 > th dose independent sin 19 NA
128 34.07 temperature 15.0 270 > th dose independent sin 21 NA
133 34.08 temperature 15.0 90 > th dose independent sin 7 NA
134 34.08 radiation 40.0 90 < th dose independent rect. 3 10
144 34.10 humidity 90.0 720 < th dose independent rect. 10 6
149 34.10 radiation 10.0 10 < th dose dependent rect. 16 23
159 34.12 temperature 15.0 720 > th dose independent rect. 5 14
160 34.12 humidity 90.0 720 < th dose independent rect. 5 19
163 34.13 temperature 15.0 1440 > th dose independent rect. 17 10
168 34.14 humidity 90.0 720 < th dose independent rect. 19 5
180 34.15 humidity 90.0 720 < th dose independent rect. 21 1
196 34.17 temperature 20.0 720 < th dose dependent sin 23 NA
200 34.18 radiation 30.0 4320 < th dose independent rect. 17 14
225 34.21 precipitation 0.1 720 < th dose independent sin 0 NA
232 34.21 precipitation 0.1 720 < th dose dependent sin 0 NA
234 34.22 humidity 70.0 90 > th dose independent rect. 7 6
239 34.22 humidity 90.0 720 < th dose dependent rect. 19 4
246 34.23 humidity 50.0 10 > th dose independent rect. 7 14
253 34.23 temperature 20.0 720 < th dose dependent rect. 5 16
258 34.24 temperature 20.0 720 < th dose dependent rect. 5 14
260 34.25 radiation 30.0 30 < th dose independent rect. 12 1
266 34.26 humidity 90.0 720 < th dose independent sin 21 NA
272 34.26 temperature 15.0 30 > th dose independent rect. 13 18
280 34.27 temperature 20.0 720 < th dose dependent rect. 6 12
301 34.29 radiation 10.0 10 < th dose dependent rect. 7 23
314 34.31 atmosphere 1010.0 270 < th dose independent rect. 19 10
317 34.31 radiation 40.0 90 < th dose independent rect. 7 14
322 34.32 humidity 80.0 10 > th dose independent rect. 7 6
350 34.34 radiation 10.0 10 < th dose dependent rect. 3 23
356 34.35 wind 1.0 30 > th dose independent rect. 7 14
367 34.36 wind 1.0 720 > th dose independent rect. 19 8
391 34.37 radiation 10.0 10 < th dose dependent rect. 16 18
420 34.39 temperature 25.0 720 < th dose independent rect. 2 9
424 34.39 temperature 10.0 720 > th dose dependent rect. 19 3
437 34.40 temperature 15.0 270 > th dose independent rect. 12 23
461 34.42 radiation 40.0 90 < th dose independent rect. 7 10
468 34.43 temperature 15.0 720 > th dose independent rect. 19 4
482 34.43 humidity 60.0 90 > th dose dependent rect. 9 4
487 34.43 radiation 10.0 10 < th dose dependent rect. 13 22
502 34.44 temperature 15.0 720 > th dose independent rect. 1 15
508 34.44 radiation 10.0 10 < th dose dependent no NA NA
521 34.45 temperature 20.0 720 > th dose independent rect. 6 11
535 34.46 radiation 40.0 90 < th dose independent rect. 23 14
549 34.47 wind 1.0 1440 > th dose independent rect. 23 4
561 34.47 temperature 20.0 720 < th dose dependent rect. 4 22
564 34.47 radiation 10.0 30 < th dose dependent rect. 5 23
567 34.48 radiation 40.0 90 < th dose independent sin 5 NA
569 34.48 precipitation 0.1 1440 < th dose independent rect. 24 4
580 34.48 precipitation 0.1 1440 < th dose dependent rect. 24 4
582 34.48 humidity 50.0 720 > th dose dependent rect. 16 20
583 34.49 precipitation 0.1 1440 > th dose independent rect. 2 1
584 34.49 wind 1.0 720 < th dose independent rect. 23 5
589 34.49 radiation 10.0 10 < th dose independent rect. 21 10
597 34.49 precipitation 0.1 1440 > th dose dependent rect. 2 1
606 34.50 wind 1.0 1440 > th dose independent rect. 1 1
624 34.50 radiation 10.0 10 < th dose dependent rect. 9 23
651 34.52 radiation 40.0 10 < th dose independent rect. 4 9
666 34.53 precipitation 0.1 1440 < th dose independent rect. 7 1
674 34.53 radiation 40.0 90 < th dose independent rect. 7 12
675 34.53 radiation 40.0 90 < th dose independent rect. 9 12
681 34.53 humidity 90.0 720 < th dose independent rect. 10 21
683 34.53 precipitation 0.1 1440 < th dose dependent rect. 7 1
699 34.54 humidity 70.0 10 > th dose independent rect. 7 12
701 34.54 temperature 30.0 30 < th dose independent rect. 2 14
707 34.54 precipitation 0.1 720 < th dose independent rect. 8 23
714 34.54 radiation 10.0 10 < th dose dependent rect. 23 23
715 34.54 precipitation 0.1 720 < th dose dependent rect. 8 23
724 34.55 atmosphere 1010.0 270 < th dose independent rect. 11 13
726 34.55 atmosphere 995.0 30 > th dose independent rect. 7 14
731 34.55 wind 3.0 4320 < th dose dependent rect. 23 1
735 34.55 radiation 10.0 30 < th dose dependent rect. 1 23
737 34.56 radiation 40.0 90 < th dose independent sin 23 NA
744 34.56 wind 9.0 1440 < th dose independent rect. 24 10
767 34.57 temperature 30.0 90 < th dose independent rect. 9 7
788 34.58 atmosphere 1010.0 720 < th dose independent rect. 11 5
793 34.58 temperature 30.0 1440 < th dose independent rect. 22 10
797 34.58 humidity 50.0 1440 > th dose independent rect. 22 10
802 34.58 atmosphere 995.0 1440 > th dose independent rect. 22 10
812 34.58 temperature 15.0 90 > th dose independent rect. 13 14
821 34.58 temperature 20.0 720 < th dose dependent rect. 8 23
826 34.59 wind 9.0 30 < th dose independent rect. 21 10
833 34.59 humidity 50.0 30 > th dose dependent sin 23 NA
842 34.59 temperature 20.0 720 < th dose dependent rect. 8 21
848 34.60 atmosphere 1010.0 720 < th dose independent rect. 19 3
858 34.60 temperature 30.0 30 < th dose independent rect. 21 10
859 34.60 humidity 50.0 30 > th dose independent rect. 21 10
862 34.60 atmosphere 995.0 30 > th dose independent rect. 21 10
866 34.60 precipitation 0.1 30 < th dose independent rect. 21 10
870 34.60 temperature 10.0 30 > th dose independent rect. 7 14
872 34.60 atmosphere 1015.0 30 < th dose independent rect. 7 14
873 34.60 temperature 30.0 30 < th dose independent rect. 16 17
878 34.60 radiation 1.0 90 > th dose independent rect. 17 23
879 34.60 temperature 20.0 720 < th dose dependent no NA NA
883 34.60 precipitation 0.1 30 < th dose dependent rect. 21 10
902 34.61 wind 9.0 30 < th dose independent rect. 7 14
903 34.61 temperature 15.0 10 > th dose independent rect. 13 14
907 34.61 wind 3.0 720 < th dose dependent rect. 1 1
920 34.62 precipitation 0.1 1440 < th dose independent rect. 2 2
935 34.62 humidity 50.0 14400 > th dose independent rect. 18 15
945 34.62 precipitation 0.1 1440 < th dose dependent rect. 2 2
946 34.62 humidity 80.0 1440 > th dose dependent rect. 9 4
956 34.62 temperature 20.0 720 < th dose dependent rect. 16 23
966 34.63 humidity 60.0 90 > th dose independent rect. 16 17