Os07g0593200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, SWIM-type domain containing protein.
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Os07g0593200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, SWIM-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 63.53 | 0.375 | 7.47 | -0.145 | 1.24 | -1.55 | -0.413 | -1.88 | 0.141 | 22.3 | 18.93 | 5607 | -- | -- |
| 66.64 | 0.38 | 7.54 | -0.25 | 1.24 | -0.972 | -0.405 | -- | 0.105 | 22.3 | 19.46 | 5523 | -- | -- |
| 64.19 | 0.373 | 7.47 | -0.131 | 1.24 | -1.52 | -- | -1.81 | 0.14 | 22.4 | 18.9 | 5538 | -- | -- |
| 67.28 | 0.382 | 7.54 | -0.231 | 1.24 | -0.985 | -- | -- | 0.109 | 22.4 | 19.49 | 5380 | -- | -- |
| 156.07 | 0.582 | 7.45 | -0.12 | -- | -1.65 | -- | -1.83 | 0.11 | -- | 19 | 5186 | -- | -- |
| 81.59 | 0.423 | 7.48 | 0.394 | 1.25 | -- | -0.36 | -- | 0.364 | 22.4 | -- | -- | -- | -- |
| 82.11 | 0.424 | 7.48 | 0.408 | 1.25 | -- | -- | -- | 0.364 | 22.5 | -- | -- | -- | -- |
| 155.46 | 0.581 | 7.5 | -0.0556 | -- | -1 | -- | -- | 0.126 | -- | 21.1 | 2293 | -- | -- |
| 67.92 | 0.384 | 7.53 | -- | 1.24 | -0.861 | -- | -- | 0.156 | 22.4 | 19.69 | 4936 | -- | -- |
| 178.43 | 0.624 | 7.45 | 0.43 | -- | -- | -- | -- | 0.369 | -- | -- | -- | -- | -- |
| 86.51 | 0.435 | 7.49 | -- | 1.26 | -- | -- | -- | 0.319 | 22.5 | -- | -- | -- | -- |
| 124.12 | 0.519 | 7.54 | -- | -- | -1.16 | -- | -- | -0.053 | -- | 25.27 | 820 | -- | -- |
| 183.3 | 0.632 | 7.46 | -- | -- | -- | -- | -- | 0.322 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 63.80 | temperature | 20 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 2 | 63.94 | temperature | 20 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 6 | 64.09 | temperature | 20 | 4320 | < th | dose dependent | rect. | 24 | 5 |
| 76 | 64.92 | temperature | 20 | 4320 | < th | dose dependent | sin | 11 | NA |
| 97 | 65.07 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 117 | 65.17 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 118 | 65.18 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 215 | 65.44 | temperature | 20 | 4320 | < th | dose independent | rect. | 13 | 18 |
| 250 | 65.51 | temperature | 20 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 251 | 65.51 | temperature | 20 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 290 | 65.58 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 2 |
| 296 | 65.59 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 2 |
| 335 | 65.64 | temperature | 20 | 4320 | < th | dose independent | sin | 14 | NA |
| 349 | 65.65 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 10 |
| 398 | 65.71 | temperature | 20 | 4320 | > th | dose independent | rect. | 13 | 18 |
| 563 | 65.89 | temperature | 20 | 4320 | < th | dose dependent | no | NA | NA |
| 658 | 66.00 | temperature | 20 | 4320 | > th | dose independent | sin | 14 | NA |
| 703 | 66.08 | temperature | 20 | 4320 | < th | dose dependent | rect. | 4 | 23 |
| 706 | 66.09 | wind | 9 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 802 | 66.20 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 10 |
| 834 | 66.23 | wind | 9 | 14400 | < th | dose independent | rect. | 5 | 8 |