Os07g0591600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os07g0591600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 158.84 | 0.592 | 7.43 | -1.32 | 0.408 | -0.988 | 0.468 | 1.49 | -0.106 | 6.57 | 25.02 | 4231 | -- | -- |
| 157.99 | 0.585 | 7.45 | -1.42 | 0.395 | -0.898 | 0.591 | -- | -0.052 | 6.88 | 24.75 | 22882 | -- | -- |
| 159.32 | 0.588 | 7.43 | -1.31 | 0.413 | -0.991 | -- | 1.5 | -0.108 | 6.27 | 25.06 | 4228 | -- | -- |
| 158.26 | 0.586 | 7.45 | -1.27 | 0.397 | -0.979 | -- | -- | 0.0156 | 6.49 | 24.8 | 22877 | -- | -- |
| 167.99 | 0.604 | 7.44 | -1.3 | -- | -0.97 | -- | 1.5 | -0.0983 | -- | 25 | 4108 | -- | -- |
| 180.87 | 0.63 | 7.52 | -2.07 | 0.392 | -- | 0.59 | -- | -0.388 | 7.33 | -- | -- | -- | -- |
| 181.76 | 0.631 | 7.52 | -2.05 | 0.396 | -- | -- | -- | -0.389 | 7.06 | -- | -- | -- | -- |
| 166.44 | 0.601 | 7.44 | -1.26 | -- | -0.982 | -- | -- | 0.0225 | -- | 24.8 | 22586 | -- | -- |
| 160.72 | 0.59 | 7.36 | -- | 0.447 | -1.67 | -- | -- | 0.32 | 6.43 | 19.98 | 47297 | -- | -- |
| 190.03 | 0.644 | 7.53 | -2.05 | -- | -- | -- | -- | -0.382 | -- | -- | -- | -- | -- |
| 293.02 | 0.801 | 7.47 | -- | 0.376 | -- | -- | -- | -0.161 | 7.41 | -- | -- | -- | -- |
| 168.35 | 0.604 | 7.37 | -- | -- | -1.76 | -- | -- | 0.322 | -- | 19.35 | 47520 | -- | -- |
| 300.54 | 0.809 | 7.48 | -- | -- | -- | -- | -- | -0.155 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 152.08 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 6 | 3 |
| 2 | 152.19 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 6 | 3 |
| 5 | 152.96 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 23 | 11 |
| 7 | 152.96 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 19 | 15 |
| 11 | 153.00 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 4 | 6 |
| 86 | 153.59 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 21 | 12 |
| 101 | 153.98 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 21 | 12 |
| 126 | 154.15 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 10 | 3 |
| 132 | 154.31 | radiation | 20.0 | 4320 | > th | dose independent | rect. | 16 | 16 |
| 138 | 154.80 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 20 | 13 |
| 143 | 154.90 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 144 | 154.90 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 146 | 154.92 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 5 |
| 147 | 154.94 | radiation | 1.0 | 4320 | < th | dose independent | sin | 8 | NA |
| 148 | 154.94 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 5 |
| 149 | 154.94 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 5 |
| 150 | 154.96 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 5 |
| 152 | 154.96 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 23 | 10 |
| 154 | 154.98 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 155 | 154.99 | wind | 9.0 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 160 | 155.05 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 173 | 155.10 | radiation | 1.0 | 4320 | > th | dose independent | sin | 8 | NA |
| 203 | 155.19 | wind | 9.0 | 43200 | < th | dose independent | rect. | 10 | 3 |
| 234 | 155.44 | wind | 7.0 | 43200 | > th | dose independent | rect. | 4 | 9 |
| 241 | 155.50 | wind | 7.0 | 43200 | < th | dose independent | rect. | 5 | 7 |
| 242 | 155.52 | wind | 7.0 | 43200 | < th | dose independent | rect. | 4 | 9 |
| 245 | 155.54 | wind | 7.0 | 43200 | < th | dose independent | rect. | 8 | 4 |
| 246 | 155.54 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 16 | 16 |
| 255 | 155.59 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 258 | 155.60 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 260 | 155.61 | wind | 7.0 | 43200 | > th | dose independent | rect. | 8 | 4 |
| 265 | 155.63 | temperature | 25.0 | 4320 | < th | dose independent | sin | 9 | NA |
| 308 | 155.86 | temperature | 25.0 | 4320 | > th | dose independent | sin | 9 | NA |
| 339 | 155.94 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 4 | 9 |
| 397 | 156.05 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 1 | 5 |
| 400 | 156.06 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 1 | 5 |
| 403 | 156.06 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 1 | 5 |
| 415 | 156.09 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 1 | 5 |
| 418 | 156.09 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 11 | 23 |
| 452 | 156.21 | wind | 9.0 | 43200 | > th | dose independent | rect. | 8 | 9 |
| 459 | 156.24 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 3 | 14 |
| 463 | 156.25 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 11 |
| 471 | 156.27 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 2 | 15 |
| 479 | 156.28 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 1 | 10 |
| 497 | 156.32 | wind | 9.0 | 43200 | < th | dose independent | rect. | 8 | 9 |
| 510 | 156.34 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 1 | 10 |
| 517 | 156.34 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 1 | 10 |
| 553 | 156.41 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 1 | 10 |
| 559 | 156.41 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 5 | 6 |
| 571 | 156.43 | wind | 9.0 | 43200 | < th | dose independent | rect. | 21 | 18 |
| 574 | 156.43 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 24 | 7 |
| 600 | 156.46 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 629 | 156.49 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 658 | 156.52 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 706 | 156.57 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 23 | 10 |
| 721 | 156.59 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 19 | 14 |
| 738 | 156.61 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 24 | 7 |
| 769 | 156.64 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 791 | 156.65 | wind | 9.0 | 43200 | > th | dose independent | rect. | 21 | 18 |
| 798 | 156.66 | temperature | 25.0 | 14400 | > th | dose independent | sin | 3 | NA |
| 799 | 156.66 | temperature | 25.0 | 14400 | < th | dose independent | sin | 3 | NA |
| 801 | 156.66 | radiation | 20.0 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 907 | 156.72 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 19 | 16 |
| 934 | 156.75 | wind | 5.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 983 | 156.79 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 7 | 1 |