Os07g0589400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Quinonprotein alcohol dehydrogenase-like domain containing protein.
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Os07g0589400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Quinonprotein alcohol dehydrogenase-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 17.67 | 0.198 | 11.2 | 0.117 | 0.459 | -0.622 | 0.382 | -0.686 | 0.203 | 3.6 | 25.7 | 205 | -- | -- |
| 18.24 | 0.199 | 11.2 | 0.0154 | 0.466 | -0.574 | 0.139 | -- | 0.184 | 3.5 | 25.75 | 160 | -- | -- |
| 18.05 | 0.198 | 11.2 | 0.102 | 0.458 | -0.606 | -- | -0.517 | 0.207 | 3.55 | 25.6 | 191 | -- | -- |
| 18.31 | 0.199 | 11.2 | 0.00617 | 0.451 | -0.57 | -- | -- | 0.18 | 3.56 | 25.7 | 177 | -- | -- |
| 24.94 | 0.233 | 11.2 | 0.166 | -- | -0.562 | -- | -0.798 | 0.233 | -- | 25.29 | 1129 | -- | -- |
| 22.96 | 0.225 | 11.2 | 0.15 | 0.341 | -- | 0.164 | -- | 0.301 | 3.65 | -- | -- | -- | -- |
| 23.04 | 0.225 | 11.2 | 0.147 | 0.342 | -- | -- | -- | 0.3 | 3.67 | -- | -- | -- | -- |
| 25.67 | 0.236 | 11.2 | 0.0113 | -- | -0.505 | -- | -- | 0.196 | -- | 26.1 | 1127 | -- | -- |
| 18.3 | 0.199 | 11.2 | -- | 0.455 | -0.57 | -- | -- | 0.18 | 3.57 | 25.8 | 177 | -- | -- |
| 29.54 | 0.254 | 11.2 | 0.161 | -- | -- | -- | -- | 0.309 | -- | -- | -- | -- | -- |
| 23.61 | 0.227 | 11.2 | -- | 0.345 | -- | -- | -- | 0.284 | 3.66 | -- | -- | -- | -- |
| 25.67 | 0.236 | 11.2 | -- | -- | -0.51 | -- | -- | 0.194 | -- | 26.1 | 1122 | -- | -- |
| 30.22 | 0.257 | 11.2 | -- | -- | -- | -- | -- | 0.291 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 17.08 | temperature | 20.0 | 90 | > th | dose independent | rect. | 9 | 19 |
| 2 | 17.23 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 3 | 17.25 | temperature | 20.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 6 | 17.33 | temperature | 20.0 | 10 | > th | dose independent | rect. | 9 | 20 |
| 7 | 17.39 | temperature | 20.0 | 10 | > th | dose independent | rect. | 20 | 9 |
| 11 | 17.47 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 20 | 16 |
| 12 | 17.49 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 9 | 20 |
| 13 | 17.52 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 18 | 9 |
| 23 | 17.60 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 10 | 22 |
| 46 | 17.75 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 20 | 9 |
| 80 | 17.90 | temperature | 25.0 | 270 | < th | dose dependent | no | NA | NA |
| 90 | 17.93 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 93 | 17.96 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 3 | 23 |
| 94 | 17.96 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 96 | 17.96 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 105 | 17.98 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 19 | 23 |
| 106 | 17.99 | temperature | 20.0 | 270 | > th | dose independent | rect. | 18 | 18 |
| 112 | 18.00 | temperature | 20.0 | 270 | > th | dose independent | rect. | 20 | 16 |
| 141 | 18.08 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 17 | 21 |
| 239 | 18.26 | temperature | 20.0 | 270 | > th | dose independent | rect. | 17 | 21 |
| 254 | 18.29 | temperature | 30.0 | 270 | < th | dose dependent | sin | 9 | NA |
| 274 | 18.32 | temperature | 10.0 | 270 | > th | dose dependent | sin | 9 | NA |
| 287 | 18.33 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 21 | 11 |
| 315 | 18.37 | temperature | 20.0 | 30 | > th | dose independent | rect. | 20 | 16 |
| 325 | 18.38 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 8 | 16 |
| 428 | 18.54 | temperature | 25.0 | 720 | < th | dose dependent | sin | 19 | NA |
| 464 | 18.59 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 476 | 18.60 | temperature | 10.0 | 90 | > th | dose dependent | sin | 7 | NA |
| 624 | 18.75 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 625 | 18.75 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 15 | 9 |
| 659 | 18.79 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 675 | 18.80 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 718 | 18.83 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 726 | 18.84 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 730 | 18.84 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 825 | 18.92 | temperature | 20.0 | 10 | > th | dose independent | rect. | 20 | 18 |
| 868 | 18.95 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 22 | 8 |
| 900 | 18.98 | temperature | 25.0 | 270 | < th | dose independent | rect. | 11 | 21 |