Os07g0586100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13).
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Os07g0586100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 320.14 | 0.841 | 7.84 | 1.48 | 5.34 | -2.04 | -0.951 | 0.258 | -0.103 | 14.6 | 70.72 | 77 | 3.38 | 19.7 |
| 320.33 | 0.834 | 7.84 | 1.48 | 5.35 | -2.03 | -0.976 | -- | -0.0995 | 14.6 | 70.7 | 77 | 3.38 | 19.7 |
| 323.21 | 0.837 | 7.85 | 1.45 | 5.36 | -2.02 | -- | 0.405 | -0.104 | 14.6 | 70.7 | 78 | 3.4 | 19.6 |
| 323.67 | 0.838 | 7.85 | 1.45 | 5.36 | -2.02 | -- | -- | -0.101 | 14.6 | 70.6 | 79 | 3.39 | 19.6 |
| 720.01 | 1.25 | 7.94 | 1.44 | -- | -5.6 | -- | 0.741 | -0.549 | -- | 68.23 | 84 | 18.3 | 24 |
| 486.92 | 1.03 | 7.84 | 1.45 | 6.04 | -- | -0.598 | -- | -0.0197 | 14.9 | -- | -- | -- | -- |
| 488.13 | 1.03 | 7.84 | 1.43 | 6.03 | -- | -- | -- | -0.0232 | 14.9 | -- | -- | -- | -- |
| 721.67 | 1.25 | 7.95 | 1.44 | -- | -5.66 | -- | -- | -0.545 | -- | 68.36 | 84 | 18.6 | 24 |
| 379.58 | 0.907 | 7.85 | -- | 5.4 | -1.96 | -- | -- | -0.203 | 14.6 | 69.8 | 77 | 3.42 | 19.6 |
| 2588.64 | 2.38 | 7.86 | 1.18 | -- | -- | -- | -- | -0.179 | -- | -- | -- | -- | -- |
| 542.38 | 1.09 | 7.88 | -- | 6.01 | -- | -- | -- | -0.183 | 14.9 | -- | -- | -- | -- |
| 774.82 | 1.3 | 7.98 | -- | -- | -5.65 | -- | -- | -0.685 | -- | 67.85 | 81 | 23.5 | 24 |
| 2625.2 | 2.39 | 7.89 | -- | -- | -- | -- | -- | -0.309 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 322.72 | humidity | 70 | 90 | > th | dose dependent | rect. | 3 | 20 |
| 2 | 330.24 | humidity | 70 | 270 | > th | dose dependent | rect. | 1 | 20 |
| 12 | 335.29 | humidity | 80 | 270 | > th | dose independent | rect. | 1 | 19 |
| 30 | 339.84 | humidity | 60 | 30 | > th | dose dependent | rect. | 13 | 23 |
| 36 | 341.00 | humidity | 70 | 90 | > th | dose dependent | rect. | 15 | 23 |
| 37 | 341.08 | humidity | 60 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 40 | 341.36 | humidity | 80 | 90 | > th | dose independent | rect. | 3 | 20 |
| 42 | 341.45 | humidity | 80 | 90 | > th | dose independent | rect. | 3 | 17 |
| 52 | 342.79 | humidity | 70 | 90 | > th | dose dependent | rect. | 9 | 23 |
| 58 | 343.28 | humidity | 70 | 90 | > th | dose dependent | no | NA | NA |
| 71 | 344.13 | humidity | 70 | 30 | > th | dose dependent | rect. | 11 | 23 |
| 87 | 345.03 | humidity | 80 | 10 | > th | dose independent | rect. | 4 | 19 |
| 110 | 346.87 | humidity | 60 | 10 | > th | dose dependent | rect. | 17 | 19 |
| 129 | 347.72 | humidity | 70 | 30 | > th | dose dependent | sin | 0 | NA |
| 138 | 348.21 | humidity | 70 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 163 | 348.80 | humidity | 80 | 30 | < th | dose independent | rect. | 22 | 20 |
| 222 | 351.66 | humidity | 70 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 250 | 353.05 | humidity | 70 | 30 | > th | dose dependent | rect. | 21 | 23 |
| 251 | 353.06 | humidity | 80 | 90 | < th | dose independent | rect. | 19 | 23 |
| 298 | 355.09 | radiation | 10 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 310 | 355.51 | radiation | 1 | 270 | < th | dose independent | sin | 1 | NA |
| 323 | 356.18 | radiation | 1 | 270 | > th | dose independent | sin | 1 | NA |
| 329 | 356.42 | humidity | 80 | 10 | < th | dose independent | rect. | 20 | 22 |
| 413 | 360.06 | radiation | 1 | 270 | > th | dose independent | rect. | 17 | 23 |
| 437 | 361.07 | radiation | 1 | 270 | < th | dose dependent | sin | 1 | NA |
| 481 | 362.74 | humidity | 80 | 10 | > th | dose independent | sin | 0 | NA |
| 522 | 364.02 | humidity | 90 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 542 | 364.75 | radiation | 10 | 270 | < th | dose dependent | rect. | 14 | 19 |
| 551 | 365.11 | radiation | 1 | 270 | > th | dose independent | rect. | 5 | 12 |
| 570 | 365.35 | radiation | 1 | 270 | < th | dose independent | rect. | 24 | 23 |
| 573 | 365.44 | humidity | 90 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 576 | 365.48 | radiation | 10 | 270 | < th | dose dependent | rect. | 14 | 21 |
| 596 | 365.85 | humidity | 90 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 625 | 366.48 | humidity | 90 | 10 | < th | dose dependent | rect. | 7 | 21 |
| 678 | 367.90 | radiation | 1 | 270 | < th | dose independent | rect. | 3 | 16 |
| 682 | 367.96 | humidity | 80 | 10 | < th | dose independent | sin | 0 | NA |
| 693 | 368.29 | humidity | 90 | 10 | < th | dose dependent | no | NA | NA |
| 695 | 368.34 | humidity | 90 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 707 | 368.73 | humidity | 90 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 714 | 368.83 | radiation | 10 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 729 | 369.06 | humidity | 90 | 30 | < th | dose dependent | rect. | 23 | 19 |
| 780 | 369.98 | humidity | 90 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 781 | 370.04 | radiation | 10 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 791 | 370.18 | radiation | 10 | 270 | < th | dose dependent | rect. | 2 | 17 |
| 824 | 370.75 | humidity | 80 | 90 | > th | dose independent | rect. | 3 | 12 |
| 832 | 370.85 | radiation | 10 | 270 | < th | dose dependent | no | NA | NA |
| 863 | 371.49 | humidity | 70 | 90 | > th | dose dependent | rect. | 3 | 12 |
| 872 | 371.72 | radiation | 1 | 270 | < th | dose independent | rect. | 1 | 20 |
| 918 | 372.85 | humidity | 60 | 10 | > th | dose dependent | rect. | 17 | 15 |