Os07g0582100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : HAT dimerisation domain containing protein.
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Os07g0582100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : HAT dimerisation domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 132.48 | 0.541 | 5.14 | 0.778 | 0.583 | 0.428 | 1.1 | -0.727 | 0.441 | 4.15 | 24.83 | 242 | -- | -- |
| 133.83 | 0.539 | 5.15 | 0.554 | 0.583 | 0.396 | 0.728 | -- | 0.372 | 4.16 | 24.9 | 232 | -- | -- |
| 135.26 | 0.542 | 5.14 | 0.677 | 0.566 | 0.45 | -- | -0.36 | 0.427 | 4.11 | 24.8 | 234 | -- | -- |
| 135.38 | 0.542 | 5.16 | 0.546 | 0.575 | 0.416 | -- | -- | 0.371 | 4.02 | 24.91 | 232 | -- | -- |
| 146.82 | 0.564 | 5.13 | 0.735 | -- | 0.703 | -- | -0.318 | 0.534 | -- | 25 | 230 | -- | -- |
| 141.67 | 0.558 | 5.2 | 0.435 | 0.844 | -- | 0.917 | -- | 0.165 | 4.28 | -- | -- | -- | -- |
| 143.99 | 0.562 | 5.2 | 0.427 | 0.849 | -- | -- | -- | 0.16 | 4.24 | -- | -- | -- | -- |
| 147.13 | 0.565 | 5.14 | 0.642 | -- | 0.687 | -- | -- | 0.502 | -- | 25.07 | 230 | -- | -- |
| 142.94 | 0.557 | 5.18 | -- | 0.636 | 0.332 | -- | -- | 0.266 | 4.07 | 24.99 | 232 | -- | -- |
| 182.96 | 0.632 | 5.21 | 0.461 | -- | -- | -- | -- | 0.182 | -- | -- | -- | -- | -- |
| 148.79 | 0.571 | 5.21 | -- | 0.858 | -- | -- | -- | 0.112 | 4.24 | -- | -- | -- | -- |
| 157.73 | 0.585 | 5.16 | -- | -- | 0.629 | -- | -- | 0.405 | -- | 25 | 230 | -- | -- |
| 188.55 | 0.641 | 5.22 | -- | -- | -- | -- | -- | 0.131 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 124.83 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 4 | 126.46 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 1 | 1 |
| 5 | 126.68 | temperature | 25.0 | 90 | > th | dose independent | rect. | 1 | 1 |
| 9 | 127.16 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 10 | 127.16 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 11 | 127.26 | temperature | 30.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 16 | 127.48 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 17 | 127.50 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 19 | 127.52 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 20 | 127.52 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 23 | 127.52 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 27 | 127.52 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 36 | 127.52 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 37 | 127.52 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 57 | 127.52 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 73 | 127.55 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 76 | 127.61 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 82 | 127.66 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 83 | 127.67 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 89 | 127.69 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 95 | 127.74 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 100 | 127.76 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 102 | 127.76 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 103 | 127.76 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 107 | 127.76 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 109 | 127.76 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 114 | 127.76 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 115 | 127.76 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 118 | 127.76 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 123 | 127.76 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 130 | 127.94 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 131 | 128.01 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 136 | 128.11 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 137 | 128.16 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 152 | 128.48 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 21 | 5 |
| 190 | 128.79 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 21 | 5 |
| 227 | 129.59 | temperature | 25.0 | 270 | > th | dose independent | rect. | 22 | 10 |
| 300 | 130.24 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 21 | 12 |
| 302 | 130.25 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 21 | 12 |
| 312 | 130.35 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 19 | 13 |
| 330 | 130.46 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 331 | 130.47 | temperature | 25.0 | 4320 | < th | dose independent | sin | 11 | NA |
| 337 | 130.53 | temperature | 25.0 | 4320 | > th | dose independent | sin | 11 | NA |
| 357 | 130.67 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 23 | 8 |
| 385 | 130.84 | temperature | 25.0 | 270 | > th | dose independent | rect. | 23 | 4 |
| 437 | 131.16 | temperature | 25.0 | 270 | < th | dose independent | rect. | 14 | 20 |
| 497 | 131.45 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 23 | 4 |
| 500 | 131.47 | temperature | 25.0 | 270 | < th | dose independent | sin | 10 | NA |
| 542 | 131.75 | temperature | 25.0 | 270 | > th | dose independent | sin | 9 | NA |
| 555 | 131.78 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 18 | 15 |
| 557 | 131.79 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 16 |
| 573 | 131.84 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 18 | 8 |
| 592 | 131.91 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 21 | 5 |
| 603 | 131.94 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 630 | 132.00 | temperature | 25.0 | 270 | > th | dose independent | rect. | 22 | 18 |
| 634 | 132.02 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 643 | 132.04 | temperature | 25.0 | 270 | > th | dose independent | rect. | 21 | 21 |
| 656 | 132.07 | temperature | 25.0 | 4320 | > th | dose dependent | sin | 11 | NA |
| 678 | 132.13 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 679 | 132.13 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 690 | 132.16 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 694 | 132.17 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 695 | 132.17 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 2 | 7 |
| 702 | 132.18 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 2 | 7 |
| 745 | 132.24 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 758 | 132.25 | temperature | 25.0 | 270 | > th | dose independent | rect. | 19 | 21 |
| 772 | 132.27 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 787 | 132.27 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 800 | 132.29 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 806 | 132.29 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 828 | 132.31 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 2 | 1 |
| 843 | 132.32 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 24 | 3 |
| 936 | 132.37 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 21 | 1 |