Os07g0575700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Lectin-like receptor kinase 7;2.
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Os07g0575700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Lectin-like receptor kinase 7;2.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 141.93 | 0.56 | 9.42 | 2.37 | 0.248 | -0.21 | -1.47 | -3.88 | 0.594 | 5.22 | 33.73 | 1019 | -- | -- |
| 143.28 | 0.558 | 9.37 | 2.82 | 0.322 | -0.625 | -1.04 | -- | 0.575 | 4.27 | 33.42 | 1048 | -- | -- |
| 145.29 | 0.561 | 9.42 | 2.38 | 0.297 | -0.26 | -- | -3.89 | 0.594 | 2.65 | 33.8 | 1009 | -- | -- |
| 145.8 | 0.562 | 9.37 | 2.88 | 0.31 | -0.699 | -- | -- | 0.593 | 2.71 | 33.8 | 1029 | -- | -- |
| 150.35 | 0.571 | 9.42 | 2.37 | -- | -0.208 | -- | -3.93 | 0.615 | -- | 33.8 | 1008 | -- | -- |
| 160.82 | 0.595 | 9.34 | 2.75 | 0.194 | -- | -1.62 | -- | 0.691 | 5.48 | -- | -- | -- | -- |
| 166.61 | 0.604 | 9.34 | 2.74 | 0.211 | -- | -- | -- | 0.697 | 3.41 | -- | -- | -- | -- |
| 150.63 | 0.572 | 9.36 | 2.89 | -- | -0.681 | -- | -- | 0.602 | -- | 34.1 | 1008 | -- | -- |
| 350.03 | 0.871 | 9.43 | -- | 0.557 | 1.1 | -- | -- | 0.259 | 2.83 | 0.05602 | 14 | -- | -- |
| 169.1 | 0.608 | 9.34 | 2.75 | -- | -- | -- | -- | 0.703 | -- | -- | -- | -- | -- |
| 364.93 | 0.894 | 9.41 | -- | 0.265 | -- | -- | -- | 0.392 | 3.38 | -- | -- | -- | -- |
| 231.92 | 0.709 | 9.54 | -- | -- | 1.88 | -- | -- | -0.166 | -- | -120.2 | 47520 | -- | -- |
| 368.88 | 0.896 | 9.41 | -- | -- | -- | -- | -- | 0.397 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 130.66 | temperature | 30 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 30 | 133.04 | humidity | 70 | 720 | > th | dose independent | rect. | 19 | 8 |
| 31 | 134.63 | temperature | 30 | 720 | > th | dose independent | rect. | 18 | 1 |
| 46 | 136.39 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 47 | 136.59 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 48 | 137.66 | humidity | 90 | 90 | > th | dose dependent | rect. | 3 | 2 |
| 50 | 137.77 | humidity | 70 | 720 | < th | dose independent | rect. | 18 | 14 |
| 55 | 139.06 | humidity | 90 | 10 | > th | dose independent | rect. | 3 | 3 |
| 57 | 139.22 | humidity | 70 | 720 | < th | dose independent | rect. | 18 | 2 |
| 68 | 139.23 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 11 |
| 71 | 139.46 | humidity | 70 | 720 | < th | dose dependent | rect. | 18 | 14 |
| 87 | 139.59 | wind | 1 | 90 | < th | dose independent | rect. | 4 | 1 |
| 88 | 139.66 | humidity | 70 | 720 | > th | dose independent | rect. | 18 | 13 |
| 89 | 139.77 | wind | 1 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 103 | 139.96 | humidity | 90 | 10 | > th | dose dependent | rect. | 3 | 3 |
| 104 | 140.01 | humidity | 90 | 90 | > th | dose independent | rect. | 3 | 2 |
| 110 | 140.45 | humidity | 70 | 720 | < th | dose dependent | rect. | 18 | 2 |
| 138 | 140.97 | temperature | 25 | 90 | < th | dose independent | rect. | 3 | 2 |
| 142 | 141.08 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 2 |
| 144 | 141.10 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 7 |
| 150 | 141.27 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 151 | 141.28 | humidity | 90 | 10 | > th | dose dependent | rect. | 3 | 9 |
| 153 | 141.34 | wind | 3 | 10 | < th | dose dependent | rect. | 3 | 3 |
| 159 | 141.43 | temperature | 25 | 720 | > th | dose dependent | rect. | 21 | 2 |
| 202 | 141.91 | humidity | 90 | 10 | > th | dose independent | rect. | 3 | 9 |
| 209 | 142.06 | atmosphere | 995 | 4320 | > th | dose independent | rect. | 3 | 3 |
| 228 | 142.13 | temperature | 20 | 90 | > th | dose dependent | rect. | 3 | 2 |
| 242 | 142.33 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 4 |
| 276 | 142.50 | humidity | 90 | 10 | > th | dose dependent | rect. | 3 | 19 |
| 299 | 142.57 | humidity | 80 | 720 | > th | dose independent | rect. | 21 | 1 |
| 347 | 143.02 | temperature | 20 | 90 | > th | dose independent | rect. | 3 | 2 |
| 377 | 143.26 | humidity | 70 | 1440 | < th | dose dependent | rect. | 16 | 15 |
| 378 | 143.27 | humidity | 70 | 1440 | < th | dose dependent | rect. | 16 | 4 |
| 447 | 143.71 | atmosphere | 1005 | 90 | > th | dose independent | rect. | 3 | 2 |
| 449 | 143.73 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 3 |
| 536 | 144.08 | wind | 1 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 542 | 144.10 | temperature | 20 | 10 | > th | dose independent | rect. | 3 | 3 |
| 640 | 144.37 | humidity | 90 | 10 | > th | dose dependent | sin | 4 | NA |
| 692 | 144.51 | humidity | 60 | 1440 | < th | dose independent | sin | 12 | NA |
| 767 | 144.78 | humidity | 60 | 1440 | > th | dose independent | sin | 13 | NA |
| 907 | 145.09 | wind | 1 | 4320 | < th | dose independent | rect. | 6 | 2 |