Os07g0575600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Lectin-like receptor kinase 7;2.
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Os07g0575600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Lectin-like receptor kinase 7;2.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 129.91 | 0.536 | 9.38 | 3.27 | 0.185 | 0.376 | 0.681 | -9.27 | 0.835 | 19.9 | 33.6 | 1061 | -- | -- |
| 134.87 | 0.541 | 9.21 | 4.51 | 0.247 | -0.514 | 1.23 | -- | 0.897 | 19.7 | 33.9 | 1050 | -- | -- |
| 131.22 | 0.534 | 9.38 | 3.26 | 0.187 | 0.374 | -- | -9.26 | 0.835 | 20.2 | 33.6 | 1051 | -- | -- |
| 133.72 | 0.539 | 9.23 | 4.58 | 0.191 | -0.664 | -- | -- | 0.838 | 20 | 33.76 | 1066 | -- | -- |
| 133.1 | 0.537 | 9.38 | 3.21 | -- | 0.424 | -- | -9.61 | 0.837 | -- | 33.61 | 1061 | -- | -- |
| 153.55 | 0.581 | 9.2 | 4.44 | 0.19 | -- | 0.762 | -- | 0.944 | 18.2 | -- | -- | -- | -- |
| 154.97 | 0.583 | 9.2 | 4.43 | 0.194 | -- | -- | -- | 0.947 | 18 | -- | -- | -- | -- |
| 135.65 | 0.542 | 9.22 | 4.58 | -- | -0.653 | -- | -- | 0.836 | -- | 33.77 | 1109 | -- | -- |
| 664.07 | 1.2 | 9.3 | -- | 0.0184 | 0.549 | -- | -- | 0.49 | 20 | 29.79 | 183 | -- | -- |
| 156.93 | 0.585 | 9.2 | 4.43 | -- | -- | -- | -- | 0.942 | -- | -- | -- | -- | -- |
| 673 | 1.21 | 9.31 | -- | 0.14 | -- | -- | -- | 0.453 | 19.6 | -- | -- | -- | -- |
| 664.08 | 1.2 | 9.3 | -- | -- | 0.547 | -- | -- | 0.481 | -- | 29.74 | 183 | -- | -- |
| 674.04 | 1.21 | 9.31 | -- | -- | -- | -- | -- | 0.451 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 126.84 | temperature | 30 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 15 | 126.93 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 3 |
| 16 | 126.93 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 5 |
| 18 | 126.94 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 8 |
| 25 | 127.02 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 14 |
| 29 | 127.38 | temperature | 30 | 720 | > th | dose independent | rect. | 18 | 1 |
| 57 | 127.83 | humidity | 70 | 1440 | < th | dose independent | rect. | 17 | 3 |
| 129 | 130.03 | humidity | 80 | 1440 | < th | dose dependent | rect. | 16 | 5 |
| 154 | 130.47 | humidity | 70 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 218 | 131.60 | humidity | 70 | 1440 | > th | dose independent | sin | 13 | NA |
| 241 | 131.76 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 11 |
| 348 | 132.34 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 359 | 132.51 | humidity | 70 | 1440 | < th | dose independent | sin | 13 | NA |
| 379 | 132.60 | temperature | 30 | 1440 | > th | dose dependent | sin | 12 | NA |
| 398 | 132.71 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 1 |
| 408 | 132.82 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 5 |
| 412 | 132.87 | wind | 1 | 90 | < th | dose independent | rect. | 4 | 1 |
| 434 | 132.98 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 9 |
| 439 | 133.04 | humidity | 50 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 446 | 133.12 | wind | 1 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 498 | 133.44 | humidity | 70 | 720 | < th | dose dependent | rect. | 18 | 14 |
| 534 | 133.59 | radiation | 10 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 606 | 133.90 | humidity | 80 | 1440 | < th | dose dependent | sin | 14 | NA |
| 627 | 133.95 | humidity | 70 | 1440 | < th | dose dependent | sin | 12 | NA |
| 774 | 134.57 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 15 | 11 |
| 785 | 134.67 | humidity | 80 | 720 | > th | dose independent | rect. | 20 | 2 |
| 939 | 135.36 | radiation | 10 | 1440 | < th | dose independent | rect. | 17 | 1 |
| 966 | 135.50 | radiation | 10 | 1440 | < th | dose independent | rect. | 17 | 3 |
| 976 | 135.55 | radiation | 10 | 1440 | < th | dose independent | rect. | 17 | 10 |