Os07g0573900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0573900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 167.36 | 0.608 | 10.2 | -0.0797 | 1.03 | -1.34 | 0.165 | -1.46 | -0.805 | 9.48 | 21.6 | 1416 | -- | -- |
| 171.12 | 0.609 | 10.2 | 0.221 | 1.03 | -1.16 | 0.19 | -- | -0.709 | 9.41 | 22.01 | 1397 | -- | -- |
| 167.31 | 0.602 | 10.2 | -0.0789 | 1.03 | -1.37 | -- | -1.53 | -0.806 | 9.49 | 21.49 | 1414 | -- | -- |
| 171.26 | 0.61 | 10.2 | 0.227 | 1.03 | -1.16 | -- | -- | -0.707 | 9.45 | 22.05 | 1397 | -- | -- |
| 210.2 | 0.675 | 10.2 | -0.0475 | -- | -1.32 | -- | -0.942 | -0.739 | -- | 22 | 859 | -- | -- |
| 218.53 | 0.693 | 10.3 | -0.205 | 1.05 | -- | 0.118 | -- | -1.08 | 9.65 | -- | -- | -- | -- |
| 218.58 | 0.692 | 10.3 | -0.2 | 1.05 | -- | -- | -- | -1.08 | 9.67 | -- | -- | -- | -- |
| 212.78 | 0.679 | 10.2 | 0.243 | -- | -1.29 | -- | -- | -0.666 | -- | 22 | 837 | -- | -- |
| 172.49 | 0.612 | 10.2 | -- | 1.03 | -1.1 | -- | -- | -0.748 | 9.45 | 22.09 | 1397 | -- | -- |
| 283.52 | 0.787 | 10.3 | -0.209 | -- | -- | -- | -- | -1.08 | -- | -- | -- | -- | -- |
| 219.64 | 0.693 | 10.3 | -- | 1.05 | -- | -- | -- | -1.06 | 9.68 | -- | -- | -- | -- |
| 214.2 | 0.682 | 10.2 | -- | -- | -1.24 | -- | -- | -0.703 | -- | 22 | 831 | -- | -- |
| 284.68 | 0.788 | 10.3 | -- | -- | -- | -- | -- | -1.06 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 165.01 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 15 | 167.77 | temperature | 10 | 4320 | > th | dose dependent | rect. | 24 | 2 |
| 17 | 167.84 | temperature | 30 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 92 | 169.51 | temperature | 25 | 4320 | < th | dose independent | rect. | 21 | 6 |
| 109 | 169.75 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 110 | 169.75 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 149 | 170.37 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 193 | 170.65 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 3 |
| 272 | 171.07 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 323 | 171.36 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 19 |
| 335 | 171.45 | temperature | 25 | 4320 | < th | dose independent | rect. | 23 | 2 |
| 380 | 171.69 | temperature | 25 | 4320 | > th | dose independent | rect. | 21 | 5 |
| 441 | 172.06 | temperature | 25 | 4320 | > th | dose independent | rect. | 23 | 2 |
| 524 | 172.52 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 22 |
| 839 | 173.87 | wind | 9 | 14400 | > th | dose dependent | rect. | 11 | 2 |
| 855 | 173.90 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 875 | 173.99 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 967 | 174.33 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 23 |