Os07g0573200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0573200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 111.7 | 0.497 | 14.8 | 0.0661 | 0.174 | -1.01 | -0.256 | -1.66 | -0.643 | 20.4 | 21.49 | 2090 | -- | -- |
| 115.52 | 0.501 | 14.8 | 0.309 | 0.222 | -0.718 | -0.628 | -- | -0.565 | 20.4 | 22.5 | 856 | -- | -- |
| 111.89 | 0.493 | 14.8 | 0.064 | 0.176 | -1.01 | -- | -1.7 | -0.645 | 20.2 | 21.48 | 2086 | -- | -- |
| 115.97 | 0.502 | 14.8 | 0.339 | 0.24 | -0.743 | -- | -- | -0.553 | 21.2 | 22.35 | 856 | -- | -- |
| 113.57 | 0.496 | 14.8 | 0.0587 | -- | -0.991 | -- | -1.68 | -0.652 | -- | 21.49 | 2086 | -- | -- |
| 140.32 | 0.555 | 14.8 | 0.0884 | 0.114 | -- | -0.498 | -- | -0.808 | 20 | -- | -- | -- | -- |
| 141.02 | 0.556 | 14.8 | 0.103 | 0.118 | -- | -- | -- | -0.808 | 19.2 | -- | -- | -- | -- |
| 118.56 | 0.507 | 14.7 | 0.375 | -- | -0.772 | -- | -- | -0.548 | -- | 22.21 | 1281 | -- | -- |
| 118.84 | 0.508 | 14.8 | -- | 0.236 | -0.688 | -- | -- | -0.597 | 21.1 | 22.4 | 859 | -- | -- |
| 141.76 | 0.556 | 14.8 | 0.101 | -- | -- | -- | -- | -0.81 | -- | -- | -- | -- | -- |
| 141.3 | 0.556 | 14.8 | -- | 0.117 | -- | -- | -- | -0.819 | 19.3 | -- | -- | -- | -- |
| 121.64 | 0.514 | 14.8 | -- | -- | -0.648 | -- | -- | -0.62 | -- | 22.37 | 976 | -- | -- |
| 142.03 | 0.556 | 14.8 | -- | -- | -- | -- | -- | -0.821 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 104.88 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 7 |
| 2 | 105.17 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 3 |
| 8 | 107.26 | wind | 9.0 | 14400 | > th | dose independent | rect. | 5 | 8 |
| 9 | 107.26 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 11 | 107.45 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 3 |
| 13 | 107.57 | wind | 9.0 | 14400 | < th | dose independent | rect. | 1 | 12 |
| 18 | 108.20 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 21 | 108.27 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 30 | 109.05 | wind | 9.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 37 | 109.29 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 42 | 109.50 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 43 | 109.63 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 44 | 109.63 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 46 | 109.82 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 6 |
| 47 | 109.82 | wind | 9.0 | 14400 | > th | dose independent | rect. | 1 | 12 |
| 58 | 110.61 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 63 | 110.70 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 69 | 111.03 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 73 | 111.14 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 75 | 111.16 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 85 | 111.41 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 1 | 2 |
| 93 | 111.57 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 102 | 111.82 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 107 | 111.89 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 135 | 112.36 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 7 |
| 167 | 112.91 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 171 | 112.98 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 175 | 113.03 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 178 | 113.10 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 186 | 113.25 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 194 | 113.50 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 200 | 113.55 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 13 | 14 |
| 203 | 113.57 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 1 | 12 |
| 223 | 113.74 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 228 | 113.78 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 230 | 113.78 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 234 | 113.81 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 12 |
| 252 | 113.94 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 258 | 113.99 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 6 |
| 259 | 114.01 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 262 | 114.07 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 13 | 9 |
| 275 | 114.15 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 16 | NA |
| 276 | 114.16 | wind | 3.0 | 14400 | < th | dose independent | sin | 7 | NA |
| 285 | 114.20 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 4 |
| 302 | 114.31 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 303 | 114.31 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 304 | 114.32 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 12 |
| 310 | 114.36 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 6 |
| 313 | 114.38 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 6 |
| 314 | 114.38 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 6 |
| 327 | 114.45 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 4 |
| 328 | 114.45 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 4 |
| 338 | 114.51 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 347 | 114.54 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 4 |
| 379 | 114.69 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 4 | 8 |
| 403 | 114.77 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 1 | 4 |
| 406 | 114.78 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 24 | 21 |
| 407 | 114.80 | wind | 3.0 | 14400 | > th | dose independent | sin | 7 | NA |
| 408 | 114.80 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 6 |
| 417 | 114.84 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 421 | 114.84 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 454 | 115.00 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 456 | 115.01 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 471 | 115.08 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 507 | 115.26 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 4 | 8 |
| 509 | 115.27 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 1 | 6 |
| 539 | 115.35 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 6 |
| 542 | 115.36 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 9 |
| 543 | 115.36 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 9 |
| 564 | 115.44 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 20 | 2 |
| 580 | 115.48 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 9 |
| 590 | 115.53 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 9 |
| 678 | 115.79 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 6 |
| 713 | 115.94 | wind | 9.0 | 14400 | < th | dose independent | sin | 5 | NA |
| 715 | 115.94 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 16 |
| 725 | 115.96 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 746 | 116.00 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 18 |
| 761 | 116.03 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 22 | 10 |
| 779 | 116.08 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 22 | 15 |
| 783 | 116.09 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 23 | 8 |
| 788 | 116.10 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 12 |
| 792 | 116.11 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 4 | 9 |
| 811 | 116.15 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 8 | 4 |
| 829 | 116.18 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 9 | 3 |
| 848 | 116.22 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 20 | 8 |
| 853 | 116.23 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 21 | 2 |
| 866 | 116.25 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 20 | 8 |
| 877 | 116.27 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 888 | 116.29 | temperature | 25.0 | 720 | < th | dose dependent | no | NA | NA |
| 895 | 116.30 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 18 |
| 899 | 116.31 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 14 |
| 906 | 116.32 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 9 |
| 915 | 116.33 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 13 | 23 |
| 920 | 116.35 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 13 | 15 |
| 960 | 116.43 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 16 | 23 |
| 969 | 116.45 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 16 |
| 972 | 116.45 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 2 | 10 |
| 979 | 116.48 | wind | 3.0 | 14400 | < th | dose dependent | sin | 7 | NA |
| 982 | 116.49 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 13 | 15 |