Os07g0573000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0573000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 237.71 | 0.724 | 3.48 | -1.03 | 0.914 | -0.858 | -2.33 | 4.87 | -0.32 | 8.89 | 1.875 | 1363 | -- | -- |
| 258.63 | 0.749 | 3.59 | -1.12 | 0.88 | -0.638 | -2.02 | -- | -0.351 | 9.15 | 1.301 | 3243 | -- | -- |
| 253.26 | 0.741 | 3.45 | -1.13 | 0.94 | -0.575 | -- | 4.17 | -0.236 | 9.76 | 1.755 | 1370 | -- | -- |
| 266.72 | 0.761 | 3.58 | -1.19 | 0.896 | -0.763 | -- | -- | -0.291 | 9.74 | 0.5 | 3246 | -- | -- |
| 302.1 | 0.81 | 3.52 | -1.2 | -- | -0.512 | -- | 3.64 | -0.266 | -- | 1.779 | 1379 | -- | -- |
| 264.67 | 0.763 | 3.55 | -1.27 | 0.847 | -- | -1.77 | -- | -0.193 | 9.09 | -- | -- | -- | -- |
| 273.64 | 0.775 | 3.55 | -1.32 | 0.856 | -- | -- | -- | -0.19 | 9.91 | -- | -- | -- | -- |
| 314.54 | 0.826 | 3.59 | -1.28 | -- | -0.521 | -- | -- | -0.239 | -- | 0.5 | 2705 | -- | -- |
| 299.41 | 0.806 | 3.59 | -- | 1 | -1.03 | -- | -- | -0.331 | 9.59 | 1.501 | 3636 | -- | -- |
| 317.57 | 0.833 | 3.58 | -1.33 | -- | -- | -- | -- | -0.19 | -- | -- | -- | -- | -- |
| 319.61 | 0.836 | 3.52 | -- | 0.861 | -- | -- | -- | -0.0425 | 10 | -- | -- | -- | -- |
| 348.42 | 0.869 | 3.6 | -- | -- | -1.09 | -- | -- | -0.337 | -- | 1.675 | 5745 | -- | -- |
| 364.26 | 0.891 | 3.54 | -- | -- | -- | -- | -- | -0.042 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 227.99 | wind | 1.0 | 720 | > th | dose independent | rect. | 9 | 21 |
| 2 | 228.36 | wind | 1.0 | 720 | > th | dose independent | rect. | 11 | 18 |
| 7 | 230.02 | wind | 1.0 | 720 | > th | dose independent | sin | 18 | NA |
| 12 | 232.19 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 16 | 232.64 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 9 | 2 |
| 19 | 232.88 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 18 | 17 |
| 21 | 233.01 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 3 | 8 |
| 27 | 233.05 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 6 | 5 |
| 30 | 233.10 | wind | 1.0 | 1440 | > th | dose independent | rect. | 7 | 20 |
| 31 | 233.17 | wind | 1.0 | 1440 | > th | dose independent | rect. | 7 | 22 |
| 35 | 233.34 | wind | 1.0 | 1440 | < th | dose independent | rect. | 7 | 20 |
| 42 | 233.57 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 18 | 9 |
| 43 | 233.59 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 20 |
| 48 | 233.81 | wind | 1.0 | 720 | > th | dose independent | rect. | 18 | 19 |
| 53 | 234.04 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 4 | 6 |
| 54 | 234.10 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 9 | 18 |
| 55 | 234.29 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 59 | 234.39 | wind | 1.0 | 720 | > th | dose independent | rect. | 13 | 16 |
| 61 | 234.47 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 13 | 14 |
| 65 | 234.63 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 4 | 6 |
| 81 | 234.99 | wind | 1.0 | 720 | > th | dose dependent | rect. | 18 | 5 |
| 95 | 235.28 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 19 | 4 |
| 145 | 236.38 | temperature | 25.0 | 10 | < th | dose independent | rect. | 5 | 5 |
| 149 | 236.39 | wind | 3.0 | 1440 | < th | dose dependent | sin | 15 | NA |
| 155 | 236.58 | wind | 3.0 | 720 | > th | dose independent | rect. | 21 | 2 |
| 162 | 236.72 | wind | 3.0 | 720 | > th | dose independent | rect. | 18 | 5 |
| 168 | 236.84 | wind | 1.0 | 720 | > th | dose dependent | rect. | 21 | 2 |
| 181 | 237.12 | wind | 1.0 | 1440 | < th | dose independent | rect. | 13 | 15 |
| 183 | 237.13 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 18 | 7 |
| 186 | 237.19 | wind | 1.0 | 720 | > th | dose independent | rect. | 1 | 5 |
| 204 | 237.41 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 5 | 1 |
| 207 | 237.43 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 19 | 5 |
| 208 | 237.44 | wind | 3.0 | 720 | > th | dose independent | rect. | 18 | 7 |
| 224 | 237.57 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 18 | 13 |
| 243 | 237.72 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 7 | 5 |
| 247 | 237.76 | humidity | 50.0 | 43200 | < th | dose dependent | sin | 10 | NA |
| 248 | 237.78 | wind | 1.0 | 1440 | > th | dose independent | rect. | 18 | 10 |
| 249 | 237.81 | atmosphere | 1005.0 | 43200 | > th | dose independent | sin | 12 | NA |
| 256 | 237.87 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 15 | 20 |
| 279 | 237.99 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 18 | 13 |
| 280 | 237.99 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 17 | 15 |
| 292 | 238.08 | wind | 1.0 | 1440 | < th | dose independent | rect. | 18 | 10 |
| 297 | 238.09 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 21 | 6 |
| 312 | 238.15 | atmosphere | 1005.0 | 43200 | < th | dose independent | sin | 12 | NA |
| 315 | 238.17 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 7 | 5 |
| 317 | 238.17 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 18 | 8 |
| 321 | 238.18 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 324 | 238.18 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 344 | 238.24 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 8 | 3 |
| 359 | 238.31 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 360 | 238.31 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 19 | 21 |
| 361 | 238.31 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 371 | 238.34 | atmosphere | 1010.0 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 401 | 238.46 | wind | 3.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 424 | 238.52 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 432 | 238.53 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 18 | 22 |
| 447 | 238.58 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 23 | 4 |
| 458 | 238.59 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 21 | 20 |
| 470 | 238.61 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 472 | 238.61 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 1 |
| 481 | 238.64 | wind | 3.0 | 4320 | > th | dose independent | rect. | 19 | 4 |
| 492 | 238.66 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 10 | 22 |
| 538 | 238.73 | wind | 3.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 546 | 238.74 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 23 | 7 |
| 550 | 238.74 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 10 | 22 |
| 560 | 238.75 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 4 | 23 |
| 576 | 238.78 | atmosphere | 1005.0 | 43200 | > th | dose independent | no | NA | NA |
| 577 | 238.78 | atmosphere | 1005.0 | 43200 | < th | dose independent | no | NA | NA |
| 582 | 238.78 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 4 | 23 |
| 608 | 238.81 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 2 | 23 |
| 633 | 238.84 | wind | 1.0 | 4320 | > th | dose independent | rect. | 1 | 8 |
| 651 | 238.85 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 23 | 23 |
| 660 | 238.87 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 720 | 238.94 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 24 | 23 |
| 726 | 238.96 | wind | 1.0 | 720 | > th | dose dependent | sin | 14 | NA |
| 740 | 238.98 | wind | 1.0 | 4320 | > th | dose independent | rect. | 20 | 9 |
| 758 | 239.01 | wind | 1.0 | 4320 | > th | dose independent | rect. | 24 | 5 |
| 765 | 239.02 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 2 | 5 |
| 795 | 239.06 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 807 | 239.08 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 841 | 239.13 | atmosphere | 1005.0 | 43200 | > th | dose independent | sin | 4 | NA |
| 842 | 239.13 | atmosphere | 1005.0 | 43200 | < th | dose independent | sin | 3 | NA |
| 870 | 239.17 | wind | 3.0 | 4320 | < th | dose independent | rect. | 19 | 4 |
| 896 | 239.20 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 4 | 12 |
| 968 | 239.32 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 22 | 7 |