Os07g0571300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0571300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 160.67 | 0.596 | 8.55 | -0.258 | 2.47 | 1.15 | -1.11 | 2.25 | -0.171 | 3.2 | 26.01 | 250 | -- | -- |
| 166.62 | 0.601 | 8.51 | 0.118 | 2.5 | 0.969 | -0.514 | -- | -0.103 | 3.22 | 25.87 | 232 | -- | -- |
| 161.18 | 0.591 | 8.55 | -0.19 | 2.65 | 1.31 | -- | 2.32 | -0.184 | 3.15 | 23.4 | 487 | -- | -- |
| 167.34 | 0.602 | 8.5 | 0.14 | 2.5 | 0.993 | -- | -- | -0.0896 | 3.23 | 25.7 | 233 | -- | -- |
| 397.22 | 0.928 | 8.46 | 0.459 | -- | 3.08 | -- | 1.29 | 0.239 | -- | 30.51 | 22 | -- | -- |
| 181.05 | 0.631 | 8.55 | -0.126 | 2.69 | -- | -0.462 | -- | -0.305 | 3.28 | -- | -- | -- | -- |
| 181.74 | 0.631 | 8.55 | -0.117 | 2.69 | -- | -- | -- | -0.302 | 3.28 | -- | -- | -- | -- |
| 392.24 | 0.922 | 8.42 | 0.732 | -- | 3.26 | -- | -- | 0.303 | -- | 30.4 | 113 | -- | -- |
| 167.8 | 0.603 | 8.51 | -- | 2.51 | 0.935 | -- | -- | -0.113 | 3.25 | 25.79 | 226 | -- | -- |
| 589.83 | 1.13 | 8.55 | -0.00313 | -- | -- | -- | -- | -0.231 | -- | -- | -- | -- | -- |
| 182.1 | 0.631 | 8.55 | -- | 2.68 | -- | -- | -- | -0.289 | 3.28 | -- | -- | -- | -- |
| 406.03 | 0.938 | 8.45 | -- | -- | 3.16 | -- | -- | 0.266 | -- | 30.66 | 106 | -- | -- |
| 589.83 | 1.13 | 8.54 | -- | -- | -- | -- | -- | -0.231 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 152.32 | radiation | 1.0 | 10 | < th | dose independent | rect. | 7 | 9 |
| 2 | 152.65 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 7 | 9 |
| 13 | 154.17 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 11 | 5 |
| 17 | 154.31 | radiation | 1.0 | 10 | < th | dose independent | rect. | 11 | 5 |
| 25 | 154.81 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 19 | 15 |
| 35 | 156.08 | temperature | 25.0 | 10 | < th | dose independent | rect. | 13 | 3 |
| 44 | 156.29 | temperature | 30.0 | 90 | < th | dose dependent | sin | 8 | NA |
| 55 | 156.50 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 20 | 16 |
| 57 | 156.61 | radiation | 1.0 | 270 | < th | dose independent | rect. | 9 | 4 |
| 63 | 156.61 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 9 | 4 |
| 64 | 156.62 | radiation | 1.0 | 270 | < th | dose independent | rect. | 11 | 3 |
| 65 | 156.62 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 11 | 3 |
| 81 | 157.30 | wind | 1.0 | 14400 | < th | dose independent | rect. | 20 | 3 |
| 85 | 157.67 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 13 |
| 123 | 158.49 | wind | 1.0 | 14400 | > th | dose independent | rect. | 21 | 3 |
| 125 | 158.58 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 11 |
| 143 | 158.84 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 13 | 3 |
| 166 | 159.03 | radiation | 1.0 | 10 | < th | dose independent | rect. | 13 | 3 |
| 196 | 159.34 | temperature | 15.0 | 90 | > th | dose dependent | sin | 8 | NA |
| 211 | 159.47 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 20 | 3 |
| 250 | 159.85 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 7 | 22 |
| 300 | 160.54 | humidity | 90.0 | 270 | > th | dose independent | rect. | 11 | 2 |
| 303 | 160.57 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 11 | 2 |
| 333 | 160.78 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 20 | 23 |
| 338 | 160.81 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 23 | 23 |
| 388 | 161.23 | temperature | 25.0 | 270 | < th | dose dependent | no | NA | NA |
| 399 | 161.32 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 21 |
| 426 | 161.53 | temperature | 25.0 | 270 | > th | dose independent | rect. | 15 | 20 |
| 432 | 161.56 | temperature | 25.0 | 270 | > th | dose independent | rect. | 14 | 22 |
| 528 | 162.29 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 2 |
| 561 | 162.56 | temperature | 25.0 | 270 | > th | dose independent | rect. | 6 | 19 |
| 569 | 162.60 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 22 | 13 |
| 570 | 162.61 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 21 | 14 |
| 585 | 162.66 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 21 | 15 |
| 587 | 162.66 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 18 | 18 |
| 589 | 162.67 | atmosphere | 995.0 | 43200 | < th | dose independent | sin | 8 | NA |
| 596 | 162.68 | atmosphere | 995.0 | 43200 | < th | dose dependent | sin | 10 | NA |
| 601 | 162.69 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 17 | 16 |
| 612 | 162.71 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 21 | 12 |
| 623 | 162.74 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 2 | 7 |
| 625 | 162.74 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 22 |
| 629 | 162.75 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 24 | 10 |
| 638 | 162.77 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 2 | 7 |
| 640 | 162.77 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 17 | 11 |
| 641 | 162.78 | atmosphere | 995.0 | 43200 | > th | dose independent | sin | 8 | NA |
| 645 | 162.79 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 646 | 162.79 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 24 | 10 |
| 660 | 162.84 | temperature | 25.0 | 270 | < th | dose independent | rect. | 18 | 22 |
| 703 | 162.99 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 706 | 162.99 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 3 | 5 |
| 741 | 163.11 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 6 |
| 742 | 163.11 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 6 |
| 743 | 163.11 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 23 | 13 |
| 782 | 163.24 | atmosphere | 1005.0 | 43200 | < th | dose dependent | rect. | 9 | 4 |
| 796 | 163.28 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 6 |
| 868 | 163.49 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 20 | 19 |
| 880 | 163.51 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 6 | 21 |
| 914 | 163.55 | temperature | 25.0 | 720 | < th | dose dependent | sin | 13 | NA |
| 916 | 163.55 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 12 | 18 |
| 991 | 163.64 | temperature | 25.0 | 270 | < th | dose independent | rect. | 20 | 16 |