Os07g0570300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase M16, C-terminal domain containing protein.
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Os07g0570300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase M16, C-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 85.53 | 0.435 | 9.56 | -1.02 | 0.353 | -0.927 | -0.557 | 0.967 | -0.464 | 5.05 | 28.8 | 4775 | -- | -- |
| 85.83 | 0.431 | 9.54 | -0.774 | 0.357 | -0.823 | -0.511 | -- | -0.418 | 4.99 | 28.71 | 4788 | -- | -- |
| 86.32 | 0.433 | 9.56 | -1.02 | 0.348 | -0.923 | -- | 0.948 | -0.46 | 5.01 | 28.79 | 4770 | -- | -- |
| 86.56 | 0.433 | 9.53 | -0.778 | 0.342 | -0.826 | -- | -- | -0.407 | 5.04 | 28.78 | 4784 | -- | -- |
| 92.16 | 0.447 | 9.56 | -0.967 | -- | -0.902 | -- | 0.85 | -0.435 | -- | 28.79 | 4595 | -- | -- |
| 110.23 | 0.492 | 9.52 | -0.53 | 0.304 | -- | -0.492 | -- | -0.355 | 4.72 | -- | -- | -- | -- |
| 110.85 | 0.493 | 9.52 | -0.528 | 0.301 | -- | -- | -- | -0.352 | 4.5 | -- | -- | -- | -- |
| 92.29 | 0.447 | 9.53 | -0.767 | -- | -0.815 | -- | -- | -0.393 | -- | 28.8 | 4596 | -- | -- |
| 101.48 | 0.469 | 9.51 | -- | 0.345 | -0.669 | -- | -- | -0.304 | 4.77 | 28.9 | 4795 | -- | -- |
| 115.68 | 0.503 | 9.52 | -0.517 | -- | -- | -- | -- | -0.345 | -- | -- | -- | -- | -- |
| 118.21 | 0.509 | 9.51 | -- | 0.291 | -- | -- | -- | -0.294 | 4.55 | -- | -- | -- | -- |
| 106.12 | 0.48 | 9.49 | -- | -- | -0.633 | -- | -- | -0.192 | -- | 29.74 | 4940 | -- | -- |
| 122.72 | 0.517 | 9.51 | -- | -- | -- | -- | -- | -0.287 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 85.35 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 17 |
| 10 | 85.91 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 11 | 85.96 | temperature | 20 | 720 | > th | dose dependent | sin | 4 | NA |
| 14 | 86.05 | temperature | 30 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 45 | 86.95 | temperature | 25 | 4320 | > th | dose dependent | rect. | 24 | 9 |
| 50 | 87.07 | temperature | 25 | 4320 | > th | dose dependent | rect. | 1 | 7 |
| 51 | 87.08 | temperature | 20 | 270 | > th | dose dependent | rect. | 23 | 22 |
| 61 | 87.19 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 16 |
| 65 | 87.26 | temperature | 25 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 100 | 87.68 | temperature | 25 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 112 | 87.76 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 134 | 87.89 | temperature | 25 | 4320 | > th | dose dependent | rect. | 18 | 15 |
| 146 | 87.96 | temperature | 20 | 270 | > th | dose dependent | rect. | 11 | 23 |
| 150 | 87.98 | temperature | 25 | 4320 | > th | dose dependent | sin | 9 | NA |
| 176 | 88.07 | temperature | 30 | 720 | > th | dose independent | rect. | 8 | 9 |
| 197 | 88.10 | temperature | 25 | 270 | > th | dose dependent | no | NA | NA |
| 214 | 88.13 | temperature | 25 | 270 | > th | dose dependent | rect. | 5 | 23 |
| 226 | 88.16 | temperature | 25 | 4320 | > th | dose dependent | rect. | 19 | 1 |
| 260 | 88.24 | temperature | 30 | 720 | < th | dose independent | rect. | 7 | 10 |
| 263 | 88.25 | temperature | 30 | 720 | < th | dose independent | rect. | 24 | 17 |
| 283 | 88.29 | temperature | 30 | 720 | > th | dose independent | sin | 4 | NA |
| 320 | 88.36 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 20 |
| 326 | 88.38 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 346 | 88.39 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 364 | 88.42 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 386 | 88.47 | temperature | 25 | 4320 | > th | dose dependent | rect. | 17 | 11 |
| 433 | 88.55 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 13 |
| 439 | 88.56 | temperature | 30 | 4320 | > th | dose independent | rect. | 14 | 20 |
| 445 | 88.57 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 481 | 88.61 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 16 |
| 485 | 88.62 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 6 |
| 486 | 88.62 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 10 |
| 587 | 88.79 | radiation | 30 | 4320 | > th | dose independent | rect. | 15 | 17 |
| 627 | 88.84 | temperature | 25 | 720 | > th | dose dependent | rect. | 1 | 8 |
| 659 | 88.87 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 679 | 88.89 | temperature | 25 | 4320 | > th | dose dependent | rect. | 23 | 23 |
| 687 | 88.91 | temperature | 30 | 720 | < th | dose independent | rect. | 2 | 15 |
| 699 | 88.93 | temperature | 25 | 4320 | > th | dose dependent | no | NA | NA |
| 707 | 88.93 | temperature | 25 | 4320 | > th | dose dependent | rect. | 6 | 23 |
| 735 | 88.97 | temperature | 25 | 4320 | > th | dose dependent | rect. | 3 | 23 |
| 775 | 89.02 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 13 |
| 781 | 89.03 | temperature | 30 | 720 | < th | dose independent | sin | 3 | NA |
| 791 | 89.04 | temperature | 30 | 4320 | < th | dose independent | rect. | 1 | 15 |
| 792 | 89.04 | temperature | 30 | 4320 | < th | dose independent | rect. | 23 | 17 |
| 796 | 89.04 | temperature | 30 | 4320 | < th | dose independent | rect. | 19 | 21 |
| 805 | 89.05 | temperature | 30 | 720 | < th | dose independent | sin | 0 | NA |
| 807 | 89.05 | temperature | 30 | 4320 | < th | dose independent | rect. | 8 | 8 |
| 850 | 89.10 | temperature | 30 | 4320 | > th | dose independent | rect. | 8 | 8 |
| 914 | 89.15 | temperature | 25 | 4320 | > th | dose dependent | rect. | 6 | 16 |
| 987 | 89.22 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 9 |