Os07g0569800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Concanavalin A-like lectin/glucanase domain containing protein.
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Os07g0569800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Concanavalin A-like lectin/glucanase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 316.76 | 0.836 | 8.08 | 4.38 | 1.39 | -1.64 | 0.745 | 3.83 | 0.793 | 22.9 | 78 | 1372 | -- | -- |
| 322.86 | 0.837 | 8.1 | 4.18 | 1.53 | -0.962 | 0.839 | -- | 0.777 | 23 | 72 | 1256 | -- | -- |
| 317.93 | 0.83 | 8.08 | 4.41 | 1.5 | -1.54 | -- | 3.91 | 0.805 | 23.1 | 78 | 1268 | -- | -- |
| 325.7 | 0.841 | 8.1 | 4.15 | 1.53 | -0.928 | -- | -- | 0.777 | 23 | 72.11 | 1256 | -- | -- |
| 416.2 | 0.955 | 8.09 | 4.07 | -- | -0.712 | -- | 0.205 | 0.649 | -- | 78 | 1268 | -- | -- |
| 353.36 | 0.881 | 8.12 | 4 | 1.38 | -- | 0.688 | -- | 0.659 | 22.7 | -- | -- | -- | -- |
| 355.33 | 0.883 | 8.12 | 3.97 | 1.38 | -- | -- | -- | 0.656 | 22.7 | -- | -- | -- | -- |
| 415.09 | 0.953 | 8.08 | 4.06 | -- | -0.733 | -- | -- | 0.686 | -- | 75 | 1531 | -- | -- |
| 710.07 | 1.24 | 8.13 | -- | 1.46 | -1.47 | -- | -- | 0.71 | 23.1 | 88 | 7220 | -- | -- |
| 472.29 | 1.02 | 8.09 | 4 | -- | -- | -- | -- | 0.664 | -- | -- | -- | -- | -- |
| 770.32 | 1.3 | 8.22 | -- | 1.41 | -- | -- | -- | 0.214 | 22.9 | -- | -- | -- | -- |
| 652.09 | 1.19 | 8.23 | -- | -- | -2.94 | -- | -- | 0.026 | -- | 62.03 | 47520 | -- | -- |
| 893.39 | 1.4 | 8.19 | -- | -- | -- | -- | -- | 0.221 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 294.34 | wind | 7e+00 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 2 | 294.58 | wind | 7e+00 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 3 | 296.24 | wind | 7e+00 | 43200 | > th | dose independent | rect. | 18 | 2 |
| 14 | 303.83 | humidity | 8e+01 | 1440 | > th | dose independent | rect. | 11 | 4 |
| 16 | 304.42 | humidity | 8e+01 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 18 | 304.63 | wind | 7e+00 | 43200 | < th | dose independent | rect. | 16 | 5 |
| 20 | 304.80 | humidity | 9e+01 | 1440 | < th | dose dependent | rect. | 15 | 1 |
| 21 | 304.81 | humidity | 5e+01 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 26 | 305.27 | humidity | 8e+01 | 1440 | > th | dose independent | rect. | 10 | 11 |
| 27 | 305.30 | wind | 7e+00 | 43200 | > th | dose independent | rect. | 16 | 5 |
| 28 | 305.37 | humidity | 8e+01 | 1440 | < th | dose independent | rect. | 10 | 10 |
| 41 | 306.22 | humidity | 8e+01 | 1440 | > th | dose independent | rect. | 10 | 8 |
| 48 | 306.53 | humidity | 9e+01 | 1440 | < th | dose dependent | rect. | 13 | 6 |
| 54 | 306.69 | humidity | 5e+01 | 1440 | > th | dose dependent | rect. | 14 | 5 |
| 61 | 306.80 | humidity | 5e+01 | 1440 | > th | dose dependent | rect. | 15 | 3 |
| 69 | 306.96 | humidity | 7e+01 | 1440 | > th | dose dependent | rect. | 11 | 8 |
| 70 | 307.00 | humidity | 8e+01 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 81 | 307.32 | wind | 9e+00 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 160 | 309.01 | wind | 7e+00 | 43200 | < th | dose independent | rect. | 15 | 12 |
| 180 | 309.29 | wind | 7e+00 | 43200 | > th | dose independent | rect. | 15 | 12 |
| 223 | 309.93 | radiation | 1e+00 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 233 | 310.03 | humidity | 6e+01 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 249 | 310.18 | humidity | 8e+01 | 1440 | > th | dose independent | sin | 21 | NA |
| 259 | 310.27 | humidity | 9e+01 | 720 | > th | dose dependent | rect. | 8 | 18 |
| 277 | 310.54 | wind | 7e+00 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 280 | 310.56 | humidity | 8e+01 | 1440 | < th | dose independent | sin | 22 | NA |
| 309 | 310.91 | radiation | 1e+00 | 1440 | < th | dose independent | rect. | 10 | 19 |
| 315 | 310.95 | wind | 7e+00 | 43200 | > th | dose independent | rect. | 15 | 17 |
| 323 | 311.00 | radiation | 1e+00 | 1440 | < th | dose independent | rect. | 10 | 9 |
| 328 | 311.02 | radiation | 1e+00 | 1440 | < th | dose independent | rect. | 12 | 17 |
| 332 | 311.05 | radiation | 1e+00 | 1440 | < th | dose independent | rect. | 10 | 12 |
| 337 | 311.07 | radiation | 1e+00 | 1440 | < th | dose independent | rect. | 10 | 15 |
| 346 | 311.11 | wind | 7e+00 | 43200 | < th | dose independent | rect. | 15 | 17 |
| 350 | 311.12 | atmosphere | 1e+03 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 351 | 311.12 | radiation | 1e+00 | 1440 | < th | dose independent | rect. | 12 | 7 |
| 353 | 311.13 | radiation | 1e+00 | 4320 | < th | dose independent | rect. | 17 | 2 |
| 354 | 311.13 | radiation | 1e+00 | 4320 | < th | dose independent | rect. | 17 | 11 |
| 369 | 311.18 | radiation | 1e+00 | 4320 | < th | dose independent | rect. | 17 | 5 |
| 370 | 311.18 | radiation | 1e+00 | 4320 | < th | dose independent | rect. | 17 | 8 |
| 371 | 311.18 | radiation | 1e+00 | 1440 | < th | dose independent | rect. | 12 | 13 |
| 400 | 311.29 | wind | 7e+00 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 430 | 311.43 | radiation | 1e+00 | 1440 | < th | dose independent | sin | 18 | NA |
| 443 | 311.51 | humidity | 5e+01 | 1440 | > th | dose dependent | sin | 18 | NA |
| 444 | 311.52 | radiation | 1e+00 | 1440 | < th | dose dependent | rect. | 10 | 19 |
| 455 | 311.54 | atmosphere | 1e+03 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 501 | 311.72 | radiation | 1e+00 | 1440 | > th | dose independent | rect. | 10 | 9 |
| 536 | 311.83 | radiation | 1e+00 | 1440 | > th | dose independent | rect. | 12 | 7 |
| 583 | 311.95 | humidity | 9e+01 | 1440 | < th | dose dependent | sin | 18 | NA |
| 588 | 312.00 | radiation | 1e+00 | 1440 | > th | dose independent | sin | 18 | NA |
| 591 | 312.01 | precipitation | 1e-01 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 593 | 312.01 | precipitation | 1e-01 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 605 | 312.09 | radiation | 1e+00 | 1440 | < th | dose dependent | rect. | 10 | 9 |
| 640 | 312.23 | wind | 9e+00 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 662 | 312.27 | humidity | 9e+01 | 720 | > th | dose dependent | rect. | 21 | 5 |
| 669 | 312.29 | wind | 5e+00 | 43200 | > th | dose dependent | rect. | 16 | 9 |
| 674 | 312.31 | precipitation | 1e-01 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 753 | 312.52 | precipitation | 1e-01 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 814 | 312.76 | radiation | 1e+00 | 1440 | < th | dose dependent | sin | 18 | NA |
| 819 | 312.79 | atmosphere | 1e+03 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 828 | 312.82 | atmosphere | 1e+03 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 851 | 312.87 | humidity | 9e+01 | 720 | > th | dose dependent | rect. | 18 | 8 |
| 865 | 312.92 | humidity | 8e+01 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 905 | 313.06 | humidity | 7e+01 | 1440 | > th | dose dependent | sin | 20 | NA |
| 955 | 313.27 | atmosphere | 1e+03 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 976 | 313.32 | humidity | 9e+01 | 720 | > th | dose dependent | rect. | 14 | 12 |