Os07g0569100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Remorin, C-terminal region domain containing protein.
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Os07g0569100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Remorin, C-terminal region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 90.68 | 0.447 | 12.8 | 0.107 | 0.559 | -0.654 | -0.861 | 0.0697 | 0.188 | 10.1 | 89.19 | 7 | -- | -- |
| 90.67 | 0.443 | 12.8 | 0.109 | 0.556 | -0.646 | -0.883 | -- | 0.188 | 10.1 | 89 | 5 | -- | -- |
| 93.04 | 0.449 | 12.8 | 0.0602 | 0.574 | -0.659 | -- | 0.475 | 0.188 | 10.3 | 89.8 | 5 | -- | -- |
| 93.63 | 0.451 | 12.8 | 0.0719 | 0.572 | -0.631 | -- | -- | 0.195 | 10.3 | 89.72 | 5 | -- | -- |
| 111.65 | 0.492 | 12.8 | 0.0668 | -- | -0.754 | -- | 0.43 | 0.176 | -- | 88.71 | 4 | -- | -- |
| 102.36 | 0.474 | 12.7 | 0.0106 | 0.713 | -- | -0.554 | -- | 0.314 | 11.8 | -- | -- | -- | -- |
| 103.64 | 0.477 | 12.7 | -0.0107 | 0.715 | -- | -- | -- | 0.313 | 12 | -- | -- | -- | -- |
| 110.42 | 0.492 | 12.8 | 0.047 | -- | -0.661 | -- | -- | 0.204 | -- | 80.85 | 3 | -- | -- |
| 93.76 | 0.451 | 12.8 | -- | 0.573 | -0.625 | -- | -- | 0.192 | 10.3 | 89.78 | 5 | -- | -- |
| 135.87 | 0.545 | 12.8 | -0.0326 | -- | -- | -- | -- | 0.303 | -- | -- | -- | -- | -- |
| 103.65 | 0.476 | 12.7 | -- | 0.716 | -- | -- | -- | 0.314 | 12 | -- | -- | -- | -- |
| 109.71 | 0.488 | 12.8 | -- | -- | -0.642 | -- | -- | 0.237 | -- | 74.41 | 2 | -- | -- |
| 135.9 | 0.544 | 12.8 | -- | -- | -- | -- | -- | 0.306 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 85.43 | temperature | 30 | 30 | < th | dose independent | rect. | 14 | 16 |
| 2 | 85.47 | humidity | 60 | 10 | > th | dose dependent | rect. | 18 | 12 |
| 5 | 85.84 | humidity | 60 | 10 | > th | dose dependent | rect. | 14 | 16 |
| 29 | 88.30 | humidity | 50 | 270 | > th | dose dependent | rect. | 15 | 13 |
| 53 | 89.11 | temperature | 30 | 30 | < th | dose independent | rect. | 10 | 20 |
| 55 | 89.20 | humidity | 90 | 10 | < th | dose independent | rect. | 17 | 16 |
| 69 | 89.44 | temperature | 30 | 30 | < th | dose independent | rect. | 18 | 12 |
| 75 | 89.55 | humidity | 50 | 90 | > th | dose dependent | rect. | 9 | 21 |
| 82 | 89.66 | humidity | 60 | 90 | > th | dose independent | rect. | 14 | 16 |
| 89 | 89.71 | humidity | 60 | 10 | > th | dose dependent | rect. | 10 | 20 |
| 107 | 89.94 | temperature | 10 | 1440 | > th | dose independent | rect. | 7 | 12 |
| 110 | 89.94 | temperature | 10 | 1440 | > th | dose independent | rect. | 19 | 12 |
| 113 | 89.94 | temperature | 30 | 1440 | < th | dose independent | rect. | 19 | 12 |
| 117 | 89.94 | humidity | 50 | 1440 | > th | dose independent | rect. | 19 | 12 |
| 119 | 89.94 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 19 | 12 |
| 120 | 89.94 | radiation | 40 | 1440 | < th | dose independent | rect. | 19 | 12 |
| 136 | 90.03 | humidity | 80 | 10 | > th | dose dependent | rect. | 8 | 22 |
| 148 | 90.14 | wind | 9 | 90 | < th | dose dependent | rect. | 18 | 12 |
| 166 | 90.29 | humidity | 90 | 10 | > th | dose dependent | rect. | 24 | 23 |
| 169 | 90.34 | humidity | 70 | 10 | > th | dose independent | rect. | 15 | 15 |
| 186 | 90.43 | atmosphere | 1005 | 90 | < th | dose independent | rect. | 17 | 2 |
| 229 | 90.61 | humidity | 50 | 10 | > th | dose dependent | sin | 11 | NA |
| 247 | 90.69 | humidity | 70 | 10 | > th | dose independent | rect. | 18 | 12 |
| 289 | 90.83 | humidity | 90 | 90 | > th | dose dependent | rect. | 19 | 16 |
| 291 | 90.84 | humidity | 90 | 90 | > th | dose dependent | sin | 10 | NA |
| 302 | 90.85 | humidity | 90 | 90 | > th | dose dependent | rect. | 19 | 19 |
| 317 | 90.89 | humidity | 90 | 90 | > th | dose independent | rect. | 19 | 11 |
| 345 | 90.95 | humidity | 90 | 10 | > th | dose dependent | sin | 8 | NA |
| 354 | 90.96 | humidity | 90 | 10 | > th | dose dependent | rect. | 18 | 18 |
| 419 | 91.01 | humidity | 90 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 421 | 91.02 | humidity | 90 | 10 | > th | dose dependent | no | NA | NA |
| 429 | 91.02 | humidity | 90 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 442 | 91.03 | humidity | 90 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 567 | 91.26 | humidity | 90 | 10 | < th | dose dependent | rect. | 17 | 16 |
| 616 | 91.34 | humidity | 90 | 90 | > th | dose dependent | rect. | 13 | 22 |
| 632 | 91.38 | humidity | 90 | 90 | > th | dose dependent | no | NA | NA |
| 731 | 91.49 | wind | 9 | 720 | < th | dose independent | rect. | 7 | 23 |
| 798 | 91.58 | humidity | 90 | 10 | > th | dose independent | rect. | 8 | 22 |
| 807 | 91.60 | humidity | 90 | 10 | > th | dose independent | sin | 8 | NA |
| 817 | 91.62 | humidity | 90 | 10 | > th | dose independent | rect. | 3 | 23 |
| 818 | 91.62 | humidity | 50 | 270 | > th | dose independent | rect. | 7 | 23 |
| 848 | 91.64 | temperature | 30 | 30 | > th | dose dependent | rect. | 18 | 1 |
| 890 | 91.73 | humidity | 90 | 10 | > th | dose dependent | rect. | 24 | 6 |
| 912 | 91.80 | humidity | 90 | 90 | > th | dose independent | rect. | 19 | 16 |
| 914 | 91.80 | humidity | 60 | 270 | > th | dose independent | rect. | 8 | 21 |
| 915 | 91.80 | temperature | 30 | 270 | > th | dose dependent | rect. | 14 | 1 |
| 935 | 91.85 | wind | 9 | 720 | < th | dose dependent | rect. | 18 | 1 |
| 942 | 91.86 | humidity | 90 | 10 | > th | dose independent | rect. | 18 | 16 |
| 950 | 91.87 | humidity | 90 | 90 | > th | dose dependent | rect. | 23 | 7 |
| 958 | 91.88 | wind | 1 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 962 | 91.88 | wind | 5 | 30 | < th | dose dependent | rect. | 14 | 16 |
| 980 | 91.92 | humidity | 90 | 90 | > th | dose independent | rect. | 19 | 19 |