Os07g0568700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Polygalacturonase inhibitor 1 precursor (Polygalacturonase-inhibiting protein) (Floral organ regulator 1).
FiT-DB / Search/ Help/ Sample detail
|
Os07g0568700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Polygalacturonase inhibitor 1 precursor (Polygalacturonase-inhibiting protein) (Floral organ regulator 1).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 528.22 | 1.08 | 5.61 | -2.49 | 1.63 | 0.686 | -2.45 | -7.76 | -0.924 | 8.8 | 4.354 | 2643 | -- | -- |
| 542.31 | 1.08 | 5.73 | -2.37 | 1.58 | 1.93 | -2.33 | -- | -0.951 | 8.76 | 5.9 | 2543 | -- | -- |
| 546.48 | 1.09 | 5.61 | -2.55 | 1.64 | 0.718 | -- | -7.5 | -0.919 | 8.96 | 4.398 | 2757 | -- | -- |
| 560.21 | 1.1 | 5.72 | -2.34 | 1.62 | 1.96 | -- | -- | -0.949 | 8.93 | 5.001 | 2768 | -- | -- |
| 695.19 | 1.23 | 5.67 | -2.54 | -- | 0.656 | -- | -6.77 | -0.899 | -- | 4.722 | 2805 | -- | -- |
| 596.62 | 1.15 | 5.77 | -2.82 | 1.57 | -- | -2.31 | -- | -1.15 | 8.5 | -- | -- | -- | -- |
| 612.78 | 1.16 | 5.77 | -2.88 | 1.57 | -- | -- | -- | -1.15 | 8.8 | -- | -- | -- | -- |
| 706.23 | 1.24 | 5.76 | -2.37 | -- | 1.74 | -- | -- | -0.909 | -- | 6.345 | 2859 | -- | -- |
| 650.34 | 1.19 | 5.8 | -- | 1.68 | 3.1 | -- | -- | -1.38 | 8.7 | 3.597 | 6026 | -- | -- |
| 752.5 | 1.28 | 5.81 | -2.88 | -- | -- | -- | -- | -1.14 | -- | -- | -- | -- | -- |
| 831.94 | 1.35 | 5.7 | -- | 1.56 | -- | -- | -- | -0.828 | 8.94 | -- | -- | -- | -- |
| 799.26 | 1.32 | 5.88 | -- | -- | 2.96 | -- | -- | -1.38 | -- | 3.698 | 5858 | -- | -- |
| 971.63 | 1.45 | 5.74 | -- | -- | -- | -- | -- | -0.817 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 520.30 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 2 | 520.30 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 3 | 520.40 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 4 | 521.79 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 5 | 522.49 | wind | 5.0 | 4320 | < th | dose independent | rect. | 24 | 1 |
| 6 | 523.35 | wind | 5.0 | 4320 | > th | dose independent | rect. | 24 | 1 |
| 7 | 524.05 | wind | 3.0 | 1440 | > th | dose independent | rect. | 2 | 1 |
| 8 | 524.34 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 9 | 524.54 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 10 | 526.95 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 21 | 3 |
| 11 | 527.28 | wind | 3.0 | 1440 | < th | dose independent | rect. | 2 | 1 |
| 14 | 531.41 | wind | 7.0 | 4320 | < th | dose independent | rect. | 18 | 2 |
| 17 | 532.10 | wind | 7.0 | 4320 | > th | dose independent | rect. | 18 | 2 |
| 21 | 532.63 | wind | 7.0 | 4320 | > th | dose independent | rect. | 17 | 4 |
| 22 | 532.70 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 18 | 3 |
| 23 | 533.05 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 36 | 534.67 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 38 | 534.77 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 44 | 536.25 | wind | 1.0 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 60 | 537.83 | wind | 7.0 | 4320 | > th | dose independent | rect. | 15 | 12 |
| 63 | 537.99 | wind | 5.0 | 4320 | > th | dose independent | rect. | 18 | 10 |
| 65 | 537.99 | wind | 7.0 | 4320 | < th | dose independent | rect. | 15 | 13 |
| 70 | 538.21 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 15 | 13 |
| 76 | 538.40 | wind | 5.0 | 4320 | < th | dose independent | rect. | 18 | 11 |
| 162 | 540.15 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 18 | 8 |
| 170 | 540.22 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 8 |
| 194 | 540.58 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 8 |
| 203 | 540.76 | wind | 9.0 | 1440 | < th | dose dependent | rect. | 2 | 1 |
| 205 | 540.82 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 18 | 10 |
| 244 | 541.62 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 247 | 541.66 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 248 | 541.66 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 252 | 541.76 | temperature | 30.0 | 720 | > th | dose independent | rect. | 13 | 1 |
| 253 | 541.78 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 6 |
| 263 | 542.04 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 264 | 542.08 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 24 | 4 |
| 266 | 542.08 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 24 | 4 |
| 275 | 542.25 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 6 |
| 306 | 542.82 | wind | 5.0 | 4320 | > th | dose independent | sin | 13 | NA |
| 341 | 543.29 | wind | 5.0 | 4320 | > th | dose dependent | sin | 13 | NA |
| 367 | 543.67 | wind | 5.0 | 4320 | < th | dose independent | sin | 13 | NA |
| 379 | 543.76 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 425 | 544.50 | wind | 1.0 | 720 | < th | dose independent | rect. | 23 | 1 |
| 434 | 544.57 | wind | 7.0 | 1440 | < th | dose independent | rect. | 6 | 2 |
| 465 | 545.15 | wind | 7.0 | 1440 | > th | dose independent | rect. | 1 | 4 |
| 475 | 545.30 | wind | 5.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 491 | 545.48 | temperature | 25.0 | 10 | < th | dose independent | rect. | 3 | 6 |
| 503 | 545.59 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 24 | 4 |
| 512 | 545.71 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 24 | 4 |
| 531 | 545.98 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 24 | 10 |
| 551 | 546.17 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 572 | 546.38 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 24 | 10 |
| 589 | 546.64 | wind | 7.0 | 1440 | > th | dose independent | rect. | 3 | 2 |
| 603 | 546.91 | wind | 1.0 | 270 | < th | dose dependent | rect. | 22 | 4 |
| 606 | 546.94 | wind | 3.0 | 1440 | > th | dose independent | rect. | 1 | 11 |
| 617 | 547.08 | wind | 9.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 620 | 547.08 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 631 | 547.19 | temperature | 25.0 | 270 | > th | dose independent | rect. | 1 | 7 |
| 661 | 547.50 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 13 | 6 |
| 669 | 547.57 | wind | 3.0 | 1440 | > th | dose dependent | rect. | 21 | 15 |
| 671 | 547.59 | temperature | 15.0 | 10 | > th | dose dependent | sin | 13 | NA |
| 684 | 547.75 | wind | 3.0 | 1440 | > th | dose independent | rect. | 20 | 16 |
| 726 | 548.02 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 5 | 10 |
| 770 | 548.35 | wind | 3.0 | 1440 | > th | dose dependent | sin | 8 | NA |
| 776 | 548.42 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 5 | 10 |
| 781 | 548.46 | wind | 3.0 | 1440 | > th | dose dependent | rect. | 24 | 12 |
| 784 | 548.51 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 786 | 548.54 | precipitation | 0.1 | 270 | < th | dose independent | sin | 5 | NA |
| 787 | 548.54 | precipitation | 0.1 | 270 | < th | dose dependent | sin | 5 | NA |
| 789 | 548.58 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 18 | 21 |
| 791 | 548.59 | wind | 9.0 | 1440 | < th | dose independent | rect. | 24 | 10 |
| 813 | 548.68 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 1 | 14 |
| 822 | 548.78 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 823 | 548.78 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 1 | 3 |
| 825 | 548.78 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 19 | 20 |
| 829 | 548.81 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 21 | 18 |
| 830 | 548.83 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 832 | 548.84 | temperature | 25.0 | 30 | > th | dose independent | rect. | 18 | 9 |
| 838 | 548.86 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 23 | 16 |
| 870 | 549.16 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 16 | 1 |
| 936 | 549.46 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 24 | 4 |
| 942 | 549.53 | temperature | 20.0 | 720 | > th | dose independent | rect. | 18 | 6 |
| 951 | 549.60 | wind | 5.0 | 1440 | < th | dose independent | sin | 9 | NA |
| 970 | 549.68 | wind | 5.0 | 1440 | > th | dose independent | sin | 9 | NA |
| 978 | 549.70 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 13 | 2 |