Os07g0565700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Alpha/beta hydrolase family protein.
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Os07g0565700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Alpha/beta hydrolase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 54.82 | 0.348 | 8.54 | 1.96 | 1.33 | 0.388 | -0.769 | 0.392 | 0.205 | 11 | 80 | 249 | -- | -- |
| 55.25 | 0.346 | 8.55 | 1.97 | 1.32 | 0.406 | -0.838 | -- | 0.212 | 11 | 80.67 | 250 | -- | -- |
| 56.91 | 0.351 | 8.54 | 1.92 | 1.38 | 0.366 | -- | 0.712 | 0.197 | 10.9 | 78.37 | 187 | -- | -- |
| 58.27 | 0.356 | 8.55 | 1.94 | 1.32 | 0.414 | -- | -- | 0.21 | 11 | 81.24 | 246 | -- | -- |
| 115.88 | 0.501 | 8.6 | 1.96 | -- | 1.36 | -- | 0.464 | 0.125 | -- | 54.16 | 822 | -- | -- |
| 59.44 | 0.361 | 8.55 | 2.02 | 1.32 | -- | -0.874 | -- | 0.16 | 10.2 | -- | -- | -- | -- |
| 62.47 | 0.37 | 8.55 | 1.99 | 1.33 | -- | -- | -- | 0.157 | 10.2 | -- | -- | -- | -- |
| 107.66 | 0.483 | 8.56 | 1.96 | -- | 1.5 | -- | -- | 0.285 | -- | 70 | 831 | -- | -- |
| 154.5 | 0.579 | 8.58 | -- | 1.26 | 0.71 | -- | -- | 0.0537 | 11.3 | 84.7 | 300 | -- | -- |
| 169.21 | 0.608 | 8.59 | 1.97 | -- | -- | -- | -- | 0.155 | -- | -- | -- | -- | -- |
| 166.51 | 0.604 | 8.6 | -- | 1.32 | -- | -- | -- | -0.0641 | 10.1 | -- | -- | -- | -- |
| 203.17 | 0.664 | 8.59 | -- | -- | 1.58 | -- | -- | 0.157 | -- | 81.96 | 813 | -- | -- |
| 271.41 | 0.769 | 8.64 | -- | -- | -- | -- | -- | -0.0636 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 44.82 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 19 | 9 |
| 2 | 45.40 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 17 | 10 |
| 5 | 45.96 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 10 |
| 10 | 46.75 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 20 | 9 |
| 33 | 47.86 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 8 | 20 |
| 35 | 47.93 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 15 | 17 |
| 39 | 48.15 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 8 | 20 |
| 40 | 48.16 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 20 | 8 |
| 44 | 48.26 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 15 | 17 |
| 55 | 48.48 | atmosphere | 1015.0 | 720 | < th | dose dependent | rect. | 16 | 3 |
| 56 | 48.49 | temperature | 15.0 | 90 | > th | dose independent | rect. | 8 | 20 |
| 61 | 48.59 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 17 | 10 |
| 69 | 48.72 | temperature | 15.0 | 270 | > th | dose independent | rect. | 17 | 10 |
| 87 | 49.01 | temperature | 15.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 97 | 49.15 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 10 |
| 98 | 49.15 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 10 |
| 102 | 49.20 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 8 | 20 |
| 110 | 49.28 | wind | 7.0 | 90 | < th | dose independent | rect. | 8 | 20 |
| 119 | 49.41 | temperature | 15.0 | 90 | > th | dose independent | rect. | 19 | 9 |
| 122 | 49.44 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 13 | 9 |
| 125 | 49.48 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 20 | 9 |
| 133 | 49.51 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 10 |
| 151 | 49.65 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 14 |
| 154 | 49.66 | radiation | 20.0 | 270 | < th | dose independent | rect. | 17 | 10 |
| 157 | 49.66 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 14 |
| 158 | 49.66 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 14 |
| 166 | 49.75 | wind | 3.0 | 90 | < th | dose independent | rect. | 4 | 4 |
| 167 | 49.75 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 14 |
| 168 | 49.75 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 14 |
| 179 | 49.84 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 21 |
| 182 | 49.85 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 15 | 10 |
| 197 | 49.95 | wind | 9.0 | 90 | < th | dose dependent | rect. | 4 | 4 |
| 205 | 49.98 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 8 | 21 |
| 218 | 50.07 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 220 | 50.07 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 17 | 10 |
| 240 | 50.15 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 4 | 4 |
| 242 | 50.15 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 10 |
| 243 | 50.15 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 4 | 4 |
| 249 | 50.17 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 9 | 19 |
| 254 | 50.18 | wind | 3.0 | 270 | < th | dose independent | rect. | 4 | 2 |
| 260 | 50.20 | temperature | 10.0 | 90 | > th | dose independent | rect. | 4 | 4 |
| 262 | 50.20 | temperature | 30.0 | 90 | < th | dose independent | rect. | 4 | 4 |
| 263 | 50.20 | humidity | 50.0 | 90 | > th | dose independent | rect. | 4 | 4 |
| 265 | 50.20 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 4 | 4 |
| 266 | 50.20 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 4 | 4 |
| 269 | 50.20 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 8 | 20 |
| 270 | 50.20 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 8 | 20 |
| 275 | 50.22 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 23 |
| 277 | 50.23 | radiation | 40.0 | 90 | < th | dose independent | rect. | 4 | 4 |
| 287 | 50.29 | wind | 7.0 | 270 | < th | dose dependent | rect. | 4 | 2 |
| 289 | 50.30 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 4 | 4 |
| 295 | 50.34 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 16 | 3 |
| 298 | 50.35 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 4 | 4 |
| 302 | 50.36 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 14 |
| 329 | 50.50 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 13 | 18 |
| 332 | 50.50 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 339 | 50.52 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 4 | 19 |
| 343 | 50.53 | wind | 9.0 | 90 | < th | dose dependent | rect. | 18 | 10 |
| 345 | 50.55 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 8 | 20 |
| 355 | 50.58 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 1 |
| 357 | 50.58 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 374 | 50.67 | temperature | 15.0 | 10 | > th | dose independent | rect. | 20 | 9 |
| 376 | 50.67 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 21 |
| 377 | 50.67 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 378 | 50.67 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 379 | 50.68 | radiation | 1.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 381 | 50.68 | wind | 9.0 | 4320 | < th | dose independent | rect. | 5 | 4 |
| 388 | 50.69 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 390 | 50.69 | temperature | 30.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 391 | 50.69 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 394 | 50.69 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 395 | 50.69 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 401 | 50.69 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 425 | 50.73 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 428 | 50.73 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 430 | 50.73 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 431 | 50.73 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 4 |
| 432 | 50.73 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 9 | 20 |
| 442 | 50.75 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 4 | 4 |
| 451 | 50.78 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 16 | 10 |
| 460 | 50.80 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 14 | 16 |
| 521 | 50.93 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 2 |
| 529 | 50.94 | wind | 7.0 | 90 | < th | dose independent | rect. | 19 | 9 |
| 541 | 50.96 | wind | 9.0 | 90 | < th | dose dependent | rect. | 8 | 20 |
| 562 | 51.00 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 4 | 4 |
| 578 | 51.04 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 15 | 10 |
| 582 | 51.05 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 19 | 21 |
| 591 | 51.07 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 19 | 9 |
| 596 | 51.07 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 19 | 9 |
| 598 | 51.08 | temperature | 30.0 | 90 | < th | dose independent | rect. | 19 | 9 |
| 599 | 51.08 | humidity | 50.0 | 90 | > th | dose independent | rect. | 19 | 9 |
| 601 | 51.08 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 19 | 9 |
| 602 | 51.08 | radiation | 1.0 | 90 | < th | dose independent | rect. | 19 | 9 |
| 610 | 51.08 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 19 | 9 |
| 626 | 51.13 | radiation | 1.0 | 30 | < th | dose independent | sin | 11 | NA |
| 655 | 51.19 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 17 | 11 |
| 699 | 51.28 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 10 |
| 708 | 51.31 | radiation | 1.0 | 30 | < th | dose dependent | sin | 11 | NA |
| 722 | 51.34 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 12 | 11 |
| 737 | 51.36 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 14 |
| 753 | 51.39 | radiation | 1.0 | 30 | > th | dose independent | rect. | 5 | 3 |
| 848 | 51.51 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 3 | 22 |
| 981 | 51.64 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 15 | 13 |
| 983 | 51.64 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 1 | 18 |
| 988 | 51.64 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 15 | 13 |
| 992 | 51.64 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 1 | 18 |