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Os07g0564800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF707 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.82 (0.0158) R2 : 0.443
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.723 (0.041) R2dC : 0.381 R2C : 0.367
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.232 (0.0333) R2dN8 : 0.0764 R2N8 : 0.0625
σ : 0.298
deviance : 40.66
__
_____
C
peak time of C : 7.2
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
37 0.286 8.9 -0.661 0.728 -0.0728 -0.0286 -1.71 0.073 7.15 19.6 10445 -- --
39.74 0.294 8.82 -0.137 0.724 -0.0404 0.00307 -- 0.226 7.19 19.15 11701 -- --
37 0.283 8.9 -0.668 0.728 -0.0697 -- -1.72 0.0701 7.15 19.76 10412 -- --
38.98 0.291 8.82 -0.14 0.723 -0.142 -- -- 0.205 7.13 30.7 6231 -- --
64.75 0.375 8.92 -0.584 -- -0.117 -- -1.6 0.106 -- 19.3 12194 -- --
39.82 0.296 8.83 -0.177 0.724 -- -0.0299 -- 0.212 7.19 -- -- -- --
39.83 0.296 8.83 -0.178 0.724 -- -- -- 0.212 7.19 -- -- -- --
65.64 0.379 8.85 -0.139 -- -0.43 -- -- 0.209 -- 29.43 6406 -- --
39.2 0.292 8.81 -- 0.717 -0.181 -- -- 0.286 7.12 30.8 10598 -- --
67.58 0.384 8.84 -0.164 -- -- -- -- 0.225 -- -- -- -- --
40.66 0.298 8.82 -- 0.723 -- -- -- 0.232 7.2 -- -- -- --
66 0.38 8.84 -- -- -0.393 -- -- 0.233 -- 28.1 7854 -- --
68.29 0.386 8.84 -- -- -- -- -- 0.243 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 36.65 humidity 70.0 270 > th dose independent rect. 15 16
3 36.86 wind 5.0 43200 < th dose independent rect. 18 13
6 36.90 wind 5.0 43200 > th dose independent rect. 18 13
8 36.92 wind 1.0 720 > th dose independent rect. 8 10
11 36.95 wind 3.0 43200 > th dose dependent rect. 19 11
14 36.96 atmosphere 995.0 43200 < th dose independent rect. 16 22
17 36.97 wind 3.0 43200 > th dose dependent rect. 18 14
26 37.01 atmosphere 995.0 43200 > th dose independent rect. 17 20
29 37.02 wind 5.0 43200 < th dose independent sin 11 NA
31 37.02 atmosphere 995.0 43200 > th dose independent rect. 16 22
33 37.02 wind 3.0 43200 > th dose dependent sin 10 NA
38 37.03 atmosphere 995.0 43200 > th dose independent rect. 17 18
39 37.03 atmosphere 995.0 43200 < th dose independent rect. 17 18
41 37.03 atmosphere 995.0 43200 < th dose dependent rect. 13 13
50 37.06 wind 5.0 43200 > th dose independent sin 11 NA
51 37.06 precipitation 0.1 14400 > th dose independent rect. 14 1
57 37.06 atmosphere 995.0 43200 < th dose dependent sin 16 NA
58 37.06 precipitation 0.1 14400 > th dose dependent rect. 14 1
62 37.07 precipitation 0.1 43200 > th dose independent rect. 8 1
66 37.07 precipitation 0.1 43200 > th dose dependent rect. 8 1
82 37.11 atmosphere 995.0 43200 > th dose independent rect. 23 16
88 37.11 radiation 20.0 720 < th dose dependent rect. 19 13
96 37.13 temperature 20.0 14400 > th dose independent rect. 24 1
97 37.13 precipitation 0.1 14400 < th dose independent rect. 14 1
104 37.13 precipitation 0.1 14400 < th dose dependent rect. 14 1
107 37.14 atmosphere 995.0 43200 > th dose independent sin 5 NA
113 37.15 atmosphere 995.0 43200 < th dose independent sin 4 NA
114 37.15 humidity 60.0 270 > th dose independent rect. 12 10
116 37.15 radiation 20.0 720 < th dose dependent rect. 3 5
120 37.16 precipitation 0.1 43200 < th dose independent rect. 8 1
123 37.16 atmosphere 995.0 43200 < th dose independent rect. 21 19
126 37.16 precipitation 0.1 43200 < th dose dependent rect. 8 1
132 37.17 temperature 20.0 14400 < th dose independent rect. 24 1
138 37.18 precipitation 0.1 14400 < th dose independent rect. 8 7
142 37.18 precipitation 0.1 14400 < th dose dependent rect. 8 7
145 37.18 atmosphere 995.0 43200 < th dose dependent rect. 13 19
149 37.19 temperature 30.0 270 < th dose independent rect. 17 14
159 37.20 precipitation 0.1 14400 > th dose independent rect. 8 7
179 37.22 wind 3.0 43200 > th dose dependent rect. 21 1
182 37.23 atmosphere 995.0 43200 < th dose independent sin 12 NA
193 37.24 atmosphere 995.0 43200 > th dose independent sin 12 NA
195 37.24 wind 1.0 720 > th dose independent rect. 7 12
227 37.27 wind 7.0 43200 < th dose independent rect. 12 1
230 37.27 radiation 20.0 720 < th dose independent rect. 19 14
243 37.28 atmosphere 995.0 43200 < th dose independent rect. 17 11
245 37.28 atmosphere 995.0 43200 > th dose independent rect. 17 12
246 37.28 atmosphere 995.0 43200 < th dose independent rect. 2 13
259 37.29 wind 5.0 43200 < th dose independent rect. 21 1
307 37.31 wind 9.0 43200 < th dose dependent rect. 21 9
366 37.34 atmosphere 995.0 43200 < th dose dependent rect. 16 9
372 37.35 wind 7.0 43200 > th dose independent rect. 11 2
381 37.35 temperature 20.0 14400 > th dose dependent rect. 18 1
392 37.36 wind 5.0 43200 > th dose independent rect. 21 1
393 37.36 temperature 25.0 1440 > th dose independent rect. 19 1
420 37.37 temperature 20.0 14400 > th dose independent rect. 20 10
463 37.38 radiation 1.0 720 > th dose dependent rect. 15 18
486 37.39 radiation 30.0 4320 > th dose dependent rect. 15 17
489 37.40 temperature 20.0 14400 > th dose independent rect. 21 5
490 37.40 radiation 20.0 720 < th dose independent rect. 3 6
491 37.40 temperature 20.0 14400 > th dose independent rect. 20 7
496 37.40 humidity 70.0 10 > th dose independent rect. 19 13
507 37.40 wind 3.0 43200 > th dose dependent rect. 1 7
518 37.41 wind 5.0 43200 > th dose independent rect. 6 1
533 37.41 radiation 10.0 270 < th dose independent rect. 15 17
545 37.41 atmosphere 995.0 43200 < th dose dependent rect. 17 6
555 37.42 humidity 90.0 43200 < th dose independent rect. 10 1
563 37.42 temperature 20.0 14400 < th dose independent rect. 20 10
596 37.43 wind 7.0 43200 > th dose independent rect. 3 11
598 37.43 temperature 25.0 14400 < th dose independent rect. 4 11
610 37.43 wind 7.0 43200 > th dose dependent rect. 11 2
611 37.43 wind 3.0 43200 > th dose dependent rect. 4 3
616 37.43 wind 3.0 43200 > th dose dependent rect. 1 9
625 37.44 atmosphere 995.0 43200 < th dose independent rect. 18 5
629 37.44 atmosphere 995.0 43200 > th dose independent rect. 18 7
637 37.44 precipitation 0.1 14400 > th dose independent rect. 5 10
638 37.44 precipitation 0.1 14400 < th dose independent rect. 5 10
640 37.44 wind 7.0 43200 < th dose independent rect. 3 11
662 37.44 precipitation 0.1 14400 < th dose dependent rect. 5 10
684 37.45 temperature 25.0 14400 < th dose independent rect. 10 12
693 37.45 atmosphere 995.0 43200 < th dose dependent rect. 18 4
709 37.45 radiation 10.0 270 < th dose dependent rect. 15 16
713 37.46 wind 5.0 43200 < th dose independent rect. 6 1
718 37.46 temperature 20.0 14400 < th dose independent rect. 20 7
758 37.47 humidity 80.0 4320 > th dose independent rect. 8 1
763 37.47 wind 5.0 43200 > th dose independent rect. 3 7
773 37.47 temperature 25.0 14400 > th dose independent rect. 4 11
774 37.47 temperature 25.0 14400 > th dose independent rect. 10 11
790 37.47 precipitation 0.1 43200 > th dose dependent rect. 18 3
800 37.47 precipitation 0.1 14400 > th dose dependent rect. 6 9
811 37.47 temperature 25.0 720 > th dose dependent rect. 18 19
817 37.48 humidity 90.0 14400 < th dose independent rect. 13 1
823 37.48 temperature 25.0 14400 < th dose independent rect. 7 7
826 37.48 wind 5.0 43200 < th dose independent rect. 2 8
859 37.48 wind 3.0 43200 > th dose dependent rect. 6 2
879 37.49 temperature 25.0 14400 < th dose independent sin 21 NA
885 37.49 temperature 25.0 14400 < th dose independent rect. 10 1
890 37.49 temperature 20.0 14400 > th dose independent rect. 23 7
927 37.49 temperature 20.0 14400 > th dose dependent sin 17 NA
965 37.50 radiation 20.0 720 < th dose independent sin 11 NA
966 37.50 temperature 25.0 14400 > th dose independent rect. 10 1
992 37.50 temperature 25.0 14400 < th dose independent rect. 7 14