Os07g0564500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region domain containing protein.
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Os07g0564500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 616.3 | 1.17 | 5.2 | -2.8 | 0.892 | 3.24 | 1.45 | -6.47 | -0.16 | 16 | 27.3 | 4548 | -- | -- |
| 639.39 | 1.18 | 5.02 | -1.04 | 0.876 | 2.67 | 1.46 | -- | 0.26 | 16.5 | 27.4 | 4575 | -- | -- |
| 622.4 | 1.16 | 5.19 | -2.79 | 0.896 | 3.24 | -- | -6.49 | -0.155 | 16 | 27.3 | 4547 | -- | -- |
| 642 | 1.18 | 4.99 | -1.06 | 0.878 | 2.71 | -- | -- | 0.255 | 15.9 | 27.01 | 4637 | -- | -- |
| 662.08 | 1.2 | 5.19 | -2.79 | -- | 3.22 | -- | -6.24 | -0.184 | -- | 27.2 | 4685 | -- | -- |
| 855.83 | 1.37 | 4.9 | -0.0914 | 0.913 | -- | 1.27 | -- | 0.588 | 16.2 | -- | -- | -- | -- |
| 860.33 | 1.37 | 4.9 | -0.0786 | 0.921 | -- | -- | -- | 0.595 | 16.2 | -- | -- | -- | -- |
| 681.85 | 1.22 | 4.96 | -1.13 | -- | 2.7 | -- | -- | 0.244 | -- | 27.1 | 4715 | -- | -- |
| 669 | 1.2 | 4.93 | -- | 0.92 | 2.42 | -- | -- | 0.436 | 15.8 | 27.2 | 4576 | -- | -- |
| 906.19 | 1.41 | 4.89 | -0.115 | -- | -- | -- | -- | 0.571 | -- | -- | -- | -- | -- |
| 860.49 | 1.37 | 4.9 | -- | 0.923 | -- | -- | -- | 0.604 | 16.2 | -- | -- | -- | -- |
| 711.48 | 1.24 | 4.93 | -- | -- | 2.37 | -- | -- | 0.392 | -- | 27.18 | 4715 | -- | -- |
| 906.55 | 1.41 | 4.89 | -- | -- | -- | -- | -- | 0.584 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 601.01 | temperature | 20 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 3 | 601.32 | temperature | 20 | 14400 | > th | dose dependent | rect. | 14 | 4 |
| 32 | 604.48 | temperature | 30 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 219 | 608.49 | temperature | 15 | 14400 | > th | dose dependent | sin | 20 | NA |
| 289 | 609.22 | temperature | 25 | 14400 | < th | dose independent | rect. | 16 | 2 |
| 479 | 610.84 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 482 | 610.86 | temperature | 30 | 14400 | < th | dose dependent | sin | 19 | NA |
| 502 | 611.05 | temperature | 25 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 809 | 612.77 | temperature | 25 | 14400 | > th | dose independent | rect. | 14 | 5 |
| 814 | 612.79 | temperature | 10 | 14400 | > th | dose dependent | rect. | 12 | 22 |
| 832 | 612.87 | temperature | 10 | 14400 | > th | dose dependent | no | NA | NA |
| 939 | 613.39 | temperature | 10 | 14400 | > th | dose dependent | rect. | 16 | 23 |