Os07g0564100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.
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Os07g0564100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 268.56 | 0.77 | 6.86 | 3.26 | 1.71 | -3.12 | -2.27 | 5.67 | 1.41 | 20.5 | 24.17 | 1504 | -- | -- |
| 287.8 | 0.79 | 6.99 | 2.2 | 1.64 | -2.98 | -2 | -- | 1.34 | 20.3 | 20.55 | 5978 | -- | -- |
| 283.18 | 0.784 | 6.91 | 3.09 | 1.71 | -2.99 | -- | 4.62 | 1.45 | 20.6 | 23.06 | 1481 | -- | -- |
| 300.97 | 0.808 | 6.99 | 2.19 | 1.65 | -2.92 | -- | -- | 1.28 | 20.6 | 20.62 | 5897 | -- | -- |
| 442.73 | 0.98 | 6.91 | 2.64 | -- | -2.87 | -- | 3.07 | 1.33 | -- | 22.57 | 1447 | -- | -- |
| 546.7 | 1.1 | 7.16 | 0.677 | 1.66 | -- | -2.32 | -- | 0.53 | 20.3 | -- | -- | -- | -- |
| 562.9 | 1.11 | 7.16 | 0.742 | 1.65 | -- | -- | -- | 0.527 | 20.5 | -- | -- | -- | -- |
| 451.43 | 0.99 | 6.97 | 1.7 | -- | -2.68 | -- | -- | 1.15 | -- | 22.03 | 1465 | -- | -- |
| 395.03 | 0.926 | 7.04 | -- | 1.61 | -2.12 | -- | -- | 0.904 | 20.3 | 22.54 | 6032 | -- | -- |
| 715.46 | 1.25 | 7.12 | 0.734 | -- | -- | -- | -- | 0.511 | -- | -- | -- | -- | -- |
| 577.41 | 1.12 | 7.18 | -- | 1.65 | -- | -- | -- | 0.444 | 20.5 | -- | -- | -- | -- |
| 521.75 | 1.06 | 7.04 | -- | -- | -2.25 | -- | -- | 0.856 | -- | 22.3 | 1446 | -- | -- |
| 729.68 | 1.26 | 7.14 | -- | -- | -- | -- | -- | 0.429 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 263.33 | temperature | 25 | 1440 | > th | dose dependent | rect. | 8 | 9 |
| 29 | 266.44 | temperature | 25 | 1440 | > th | dose dependent | sin | 1 | NA |
| 185 | 271.92 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 190 | 272.32 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 191 | 272.38 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 198 | 273.15 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 5 |
| 201 | 273.41 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 5 |
| 202 | 273.42 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 390 | 278.39 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 2 |
| 399 | 278.56 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 423 | 278.94 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 2 |
| 471 | 280.18 | humidity | 90 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 481 | 280.44 | humidity | 90 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 588 | 283.07 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 9 |
| 609 | 283.72 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 7 |
| 612 | 283.79 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 9 |
| 620 | 283.99 | temperature | 20 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 633 | 284.29 | temperature | 20 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 637 | 284.36 | humidity | 90 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 676 | 285.16 | humidity | 90 | 43200 | < th | dose independent | rect. | 9 | 19 |
| 685 | 285.30 | humidity | 80 | 43200 | > th | dose independent | rect. | 11 | 2 |
| 687 | 285.32 | humidity | 90 | 43200 | < th | dose independent | sin | 16 | NA |
| 689 | 285.33 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 735 | 285.89 | temperature | 20 | 4320 | > th | dose dependent | rect. | 7 | 3 |
| 759 | 286.21 | radiation | 30 | 14400 | < th | dose dependent | rect. | 18 | 2 |
| 760 | 286.21 | radiation | 20 | 14400 | < th | dose dependent | rect. | 18 | 5 |
| 770 | 286.28 | humidity | 90 | 43200 | > th | dose dependent | sin | 16 | NA |
| 796 | 286.51 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 18 |
| 803 | 286.59 | humidity | 90 | 43200 | > th | dose independent | sin | 16 | NA |
| 808 | 286.61 | humidity | 90 | 43200 | > th | dose independent | rect. | 8 | 20 |
| 812 | 286.61 | humidity | 90 | 43200 | > th | dose dependent | rect. | 9 | 18 |
| 852 | 287.03 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 19 |
| 857 | 287.08 | humidity | 90 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 897 | 287.48 | humidity | 90 | 43200 | > th | dose independent | rect. | 17 | 18 |
| 955 | 287.92 | humidity | 80 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 965 | 287.98 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 13 |
| 989 | 288.13 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 16 |