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Os07g0562800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Myosin heavy chain class VIII A1 protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.5 (0.0184) R2 : 0.815
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.16 (0.0482) R2dC : 0.819 R2C : 0.815
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0115 (0.0388) R2dN8 : 4.62e-05 R2N8 : -0.00407
σ : 0.347
deviance : 55.15
__
_____
C
peak time of C : 6.59
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
46.12 0.319 12.6 -0.679 2.16 0.79 0.144 -3.26 0.0686 6.7 32.93 1083 -- --
47.01 0.319 12.5 -0.262 2.21 0.433 0.221 -- 0.0719 6.71 31.49 1086 -- --
46.16 0.316 12.6 -0.709 2.15 0.819 -- -3.51 0.0651 6.7 33.1 1080 -- --
46.5 0.318 12.5 -0.204 2.16 0.41 -- -- 0.0609 6.7 32.99 1080 -- --
286.92 0.789 12.6 -0.773 -- 0.929 -- -3.47 0.132 -- 32.23 5653 -- --
54.77 0.347 12.5 -0.115 2.16 -- 0.117 -- -0.00076 6.6 -- -- -- --
54.81 0.347 12.5 -0.114 2.16 -- -- -- -0.00115 6.59 -- -- -- --
281.18 0.781 12.6 -0.158 -- 0.445 -- -- 0.0499 -- 33.64 7020 -- --
47.58 0.321 12.5 -- 2.15 0.393 -- -- 0.0829 6.71 33.05 1079 -- --
298.1 0.807 12.6 -0.0616 -- -- -- -- 0.0428 -- -- -- -- --
55.15 0.347 12.5 -- 2.16 -- -- -- 0.0115 6.59 -- -- -- --
282.11 0.782 12.6 -- -- 0.463 -- -- 0.0448 -- 33.64 7020 -- --
298.2 0.806 12.6 -- -- -- -- -- 0.0497 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 36.91 precipitation 0.1 90 < th dose independent rect. 3 16
2 36.91 precipitation 0.1 90 < th dose dependent rect. 3 16
3 37.05 precipitation 0.1 90 < th dose independent rect. 19 8
4 37.05 precipitation 0.1 90 < th dose dependent rect. 19 8
5 37.24 atmosphere 995.0 90 > th dose independent rect. 3 16
6 37.27 wind 9.0 90 < th dose dependent rect. 19 8
7 37.35 radiation 1.0 90 < th dose dependent rect. 19 8
8 37.36 wind 9.0 90 < th dose independent rect. 19 8
9 37.36 temperature 10.0 90 > th dose independent rect. 19 8
10 37.36 temperature 30.0 90 < th dose independent rect. 19 8
11 37.36 humidity 50.0 90 > th dose independent rect. 19 8
13 37.36 atmosphere 995.0 90 > th dose independent rect. 19 8
14 37.36 radiation 1.0 90 < th dose independent rect. 19 8
19 37.36 temperature 10.0 90 > th dose independent rect. 3 16
20 37.36 atmosphere 1015.0 90 < th dose independent rect. 3 16
25 37.55 temperature 10.0 270 > th dose dependent rect. 19 6
28 37.76 wind 9.0 90 < th dose independent rect. 3 16
29 37.81 humidity 50.0 90 > th dose dependent rect. 19 8
30 37.96 temperature 15.0 270 > th dose independent rect. 5 9
31 38.02 temperature 10.0 90 > th dose dependent rect. 21 6
32 38.18 precipitation 0.1 270 < th dose independent rect. 1 18
33 38.18 precipitation 0.1 270 < th dose dependent rect. 1 18
35 38.26 radiation 40.0 90 < th dose independent rect. 3 16
37 38.39 precipitation 0.1 270 < th dose independent rect. 19 6
38 38.39 precipitation 0.1 270 < th dose dependent rect. 19 6
41 38.47 wind 9.0 270 < th dose independent rect. 14 15
43 38.50 wind 9.0 270 < th dose independent rect. 5 9
45 38.51 humidity 60.0 270 > th dose independent rect. 19 6
46 38.52 temperature 10.0 270 > th dose independent rect. 19 6
47 38.52 temperature 30.0 270 < th dose independent rect. 19 6
49 38.52 atmosphere 995.0 270 > th dose independent rect. 19 6
50 38.52 radiation 1.0 270 < th dose independent rect. 19 6
55 38.52 temperature 10.0 270 > th dose independent rect. 1 18
56 38.52 atmosphere 1015.0 270 < th dose independent rect. 1 18
57 38.52 radiation 1.0 270 < th dose dependent rect. 19 6
63 38.55 wind 9.0 270 < th dose independent rect. 19 6
64 38.64 wind 9.0 270 < th dose independent rect. 1 18
68 38.68 radiation 40.0 90 < th dose independent rect. 3 18
74 38.73 precipitation 0.1 270 < th dose independent rect. 5 9
76 38.73 precipitation 0.1 270 < th dose dependent rect. 5 9
81 38.79 atmosphere 995.0 270 > th dose independent rect. 5 9
82 38.79 atmosphere 1015.0 270 < th dose independent rect. 5 9
83 38.79 temperature 10.0 270 > th dose independent rect. 14 15
84 38.85 temperature 10.0 90 > th dose independent rect. 21 6
85 38.85 temperature 30.0 90 < th dose independent rect. 21 6
86 38.85 humidity 50.0 90 > th dose independent rect. 21 6
89 38.85 atmosphere 995.0 90 > th dose independent rect. 21 6
90 38.85 radiation 1.0 90 < th dose independent rect. 21 6
95 38.85 temperature 10.0 90 > th dose independent rect. 3 18
96 38.85 atmosphere 1015.0 90 < th dose independent rect. 3 18
97 38.85 radiation 1.0 90 < th dose dependent rect. 21 6
102 38.86 wind 9.0 90 < th dose independent rect. 21 6
135 39.02 atmosphere 995.0 270 > th dose independent rect. 1 18
158 39.17 humidity 50.0 90 > th dose dependent rect. 21 6
162 39.20 precipitation 0.1 270 < th dose independent rect. 14 15
164 39.20 precipitation 0.1 270 < th dose dependent rect. 14 15
187 39.47 wind 1.0 270 > th dose independent rect. 19 6
189 39.48 temperature 10.0 10 > th dose dependent rect. 20 7
192 39.49 precipitation 0.1 10 < th dose independent rect. 3 17
194 39.49 precipitation 0.1 10 < th dose dependent rect. 3 17
196 39.51 precipitation 0.1 10 < th dose independent rect. 20 7
197 39.51 precipitation 0.1 10 < th dose dependent rect. 20 7
198 39.52 radiation 40.0 270 < th dose independent rect. 14 15
204 39.54 radiation 40.0 90 < th dose independent rect. 3 8
212 39.58 radiation 1.0 270 > th dose independent rect. 4 10
225 39.59 atmosphere 995.0 90 > th dose dependent rect. 3 16
229 39.61 temperature 10.0 10 > th dose dependent rect. 22 5
254 39.71 temperature 10.0 270 > th dose dependent rect. 21 3
259 39.72 radiation 1.0 270 < th dose dependent rect. 11 14
275 39.79 atmosphere 995.0 10 > th dose independent rect. 3 17
281 39.81 radiation 40.0 270 < th dose dependent rect. 1 9
287 39.83 humidity 50.0 90 > th dose dependent rect. 3 8
298 39.87 wind 9.0 10 < th dose independent rect. 20 7
299 39.87 temperature 10.0 10 > th dose independent rect. 20 7
300 39.87 temperature 30.0 10 < th dose independent rect. 20 7
301 39.87 humidity 50.0 10 > th dose independent rect. 20 7
304 39.87 atmosphere 995.0 10 > th dose independent rect. 20 7
305 39.87 radiation 1.0 10 < th dose independent rect. 20 7
311 39.87 temperature 10.0 10 > th dose independent rect. 3 17
313 39.87 atmosphere 1015.0 10 < th dose independent rect. 3 17
314 39.87 radiation 1.0 10 < th dose dependent rect. 20 7
325 39.91 radiation 20.0 270 < th dose independent rect. 1 8
326 39.91 humidity 50.0 10 > th dose dependent rect. 20 7
333 39.98 atmosphere 995.0 270 > th dose independent rect. 14 15
383 40.03 atmosphere 1015.0 90 < th dose independent rect. 19 8
385 40.06 radiation 40.0 270 < th dose independent rect. 1 18
390 40.09 humidity 50.0 270 > th dose independent rect. 5 9
402 40.13 wind 9.0 10 < th dose independent rect. 3 17
409 40.18 atmosphere 1015.0 270 < th dose independent rect. 19 6
430 40.33 radiation 1.0 270 < th dose independent rect. 11 14
453 40.44 temperature 10.0 270 > th dose dependent rect. 6 8
480 40.55 humidity 50.0 270 > th dose independent rect. 6 19
490 40.59 atmosphere 1015.0 90 < th dose independent rect. 21 6
497 40.63 atmosphere 995.0 10 > th dose dependent rect. 3 17
502 40.65 radiation 40.0 90 < th dose dependent rect. 3 16
523 40.79 humidity 80.0 10 > th dose independent rect. 22 5
540 40.82 temperature 10.0 270 > th dose dependent rect. 19 18
541 40.82 radiation 1.0 270 < th dose dependent rect. 5 21
546 40.86 wind 9.0 10 < th dose independent rect. 22 5
547 40.86 temperature 10.0 10 > th dose independent rect. 22 5
548 40.86 temperature 30.0 10 < th dose independent rect. 22 5
549 40.86 humidity 50.0 10 > th dose independent rect. 22 5
552 40.86 atmosphere 995.0 10 > th dose independent rect. 22 5
553 40.86 radiation 1.0 10 < th dose independent rect. 22 5
558 40.86 temperature 10.0 10 > th dose independent rect. 3 19
560 40.86 atmosphere 1015.0 10 < th dose independent rect. 3 19
561 40.86 radiation 1.0 10 < th dose dependent rect. 22 5
628 40.95 humidity 50.0 10 > th dose dependent rect. 22 5
634 40.96 wind 5.0 270 < th dose independent rect. 1 5
682 41.05 wind 9.0 10 < th dose independent rect. 3 19
706 41.10 wind 1.0 270 > th dose independent rect. 5 9
755 41.16 temperature 10.0 1440 > th dose independent rect. 21 7
758 41.16 temperature 30.0 1440 < th dose independent rect. 21 7
762 41.16 humidity 50.0 1440 > th dose independent rect. 21 7
768 41.16 atmosphere 995.0 1440 > th dose independent rect. 21 7
769 41.16 radiation 1.0 1440 < th dose independent rect. 21 7
789 41.16 temperature 10.0 1440 > th dose independent rect. 4 17
794 41.16 temperature 10.0 270 > th dose dependent rect. 20 16
796 41.17 temperature 20.0 270 > th dose independent rect. 21 3
815 41.17 radiation 20.0 1440 < th dose dependent rect. 21 7
855 41.22 radiation 40.0 90 < th dose dependent rect. 3 8
873 41.27 wind 5.0 270 < th dose independent rect. 21 3
879 41.28 radiation 40.0 14400 < th dose dependent rect. 21 7
881 41.29 precipitation 0.1 270 < th dose independent rect. 1 5
884 41.29 precipitation 0.1 270 < th dose dependent rect. 1 5
896 41.32 temperature 30.0 270 < th dose independent rect. 1 8
898 41.32 wind 7.0 30 < th dose dependent rect. 3 6
927 41.37 humidity 50.0 270 > th dose dependent rect. 21 3
942 41.42 humidity 50.0 90 > th dose dependent rect. 3 6
943 41.42 radiation 40.0 90 < th dose dependent rect. 3 6
947 41.44 atmosphere 995.0 90 > th dose dependent rect. 19 8
948 41.45 atmosphere 1015.0 10 < th dose independent rect. 20 7
949 41.45 wind 1.0 270 > th dose independent rect. 14 15
953 41.46 wind 5.0 270 < th dose independent rect. 3 1
961 41.47 wind 5.0 270 < th dose independent rect. 2 3
963 41.47 radiation 10.0 270 < th dose independent rect. 1 5
964 41.47 precipitation 0.1 270 < th dose independent rect. 1 8
966 41.47 precipitation 0.1 270 < th dose dependent rect. 1 8
977 41.51 radiation 1.0 270 < th dose independent rect. 1 10
979 41.51 wind 9.0 270 < th dose dependent rect. 1 5
985 41.52 temperature 10.0 270 > th dose independent rect. 1 5
987 41.52 temperature 30.0 270 < th dose independent rect. 1 5
988 41.52 humidity 50.0 270 > th dose independent rect. 1 5
991 41.52 atmosphere 995.0 270 > th dose independent rect. 1 5
992 41.52 atmosphere 1015.0 270 < th dose independent rect. 1 5
1000 41.52 temperature 10.0 270 > th dose independent rect. 6 19