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Os07g0560100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description :


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.04 (0.0194) R2 : 0.304
β1 : 0.962 (0.0709) R2dD : 0.291 R2D : 0.301
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0522 (0.0414) R2dN8 : 0.00326 R2N8 : 0.0128
σ : 0.364
deviance : 60.54
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
51.34 0.337 8.06 0.777 0.162 0.422 -0.636 1.6 -0.0489 21 31.3 9 -- --
53.77 0.342 8.03 1.07 0.191 0.556 -0.46 -- 0.0331 19.4 33.84 11 -- --
52.34 0.34 8.05 0.866 0.187 0.514 -- 1.31 -0.0188 19 31.3 9 -- --
54.22 0.343 8.03 1.08 0.185 0.613 -- -- 0.0334 19.2 39.87 10 -- --
54.1 0.343 8.05 0.861 -- 0.476 -- 1.26 -0.0267 -- 31.2 8 -- --
57.52 0.356 8.05 0.948 0.21 -- -0.275 -- -0.0532 22.2 -- -- -- --
57.8 0.356 8.05 0.958 0.211 -- -- -- -0.0532 22.6 -- -- -- --
55.96 0.348 8.03 1.06 -- 0.564 -- -- 0.0231 -- 39.81 4 -- --
81.89 0.421 8.07 -- 0.202 0.0928 -- -- -0.146 22.5 81.51 5 -- --
60.54 0.364 8.04 0.962 -- -- -- -- -0.0522 -- -- -- -- --
81.97 0.424 8.07 -- 0.218 -- -- -- -0.16 22.9 -- -- -- --
84.13 0.427 8.06 -- -- 0.23 -- -- -0.133 -- 54.94 2 -- --
84.93 0.43 8.07 -- -- -- -- -- -0.159 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 46.12 temperature 10.0 270 > th dose dependent rect. 15 9
6 47.75 temperature 30.0 10 < th dose dependent rect. 12 18
7 47.79 temperature 30.0 270 < th dose independent rect. 10 19
9 47.82 temperature 10.0 270 > th dose dependent rect. 15 19
15 48.23 temperature 20.0 90 > th dose dependent rect. 17 18
20 48.29 temperature 30.0 270 < th dose independent rect. 10 5
27 48.40 radiation 10.0 10 < th dose dependent rect. 20 22
41 48.63 radiation 10.0 90 < th dose dependent rect. 20 21
42 48.63 temperature 20.0 10 > th dose dependent rect. 16 22
50 48.75 radiation 1.0 270 > th dose dependent rect. 16 16
52 48.76 radiation 1.0 270 > th dose independent rect. 16 17
67 48.95 temperature 15.0 10 > th dose dependent rect. 6 18
71 49.01 temperature 10.0 90 > th dose dependent rect. 6 17
74 49.04 radiation 1.0 270 > th dose independent rect. 15 19
77 49.07 precipitation 0.1 270 < th dose independent rect. 5 14
78 49.07 precipitation 0.1 270 < th dose dependent rect. 5 14
89 49.12 temperature 10.0 10 > th dose dependent rect. 6 15
90 49.13 radiation 1.0 270 > th dose independent sin 12 NA
91 49.13 precipitation 0.1 270 < th dose independent rect. 15 19
92 49.13 precipitation 0.1 270 < th dose dependent rect. 15 19
93 49.14 radiation 10.0 270 < th dose dependent sin 12 NA
100 49.18 humidity 70.0 270 > th dose independent rect. 19 10
117 49.29 radiation 1.0 270 < th dose independent sin 12 NA
135 49.36 temperature 15.0 270 > th dose independent rect. 10 5
159 49.49 temperature 25.0 30 > th dose dependent sin 10 NA
174 49.54 humidity 90.0 270 < th dose independent rect. 10 5
181 49.57 humidity 50.0 270 > th dose independent rect. 10 18
203 49.68 humidity 50.0 270 > th dose independent rect. 9 20
209 49.70 wind 9.0 270 < th dose independent rect. 10 5
228 49.75 wind 1.0 270 > th dose independent rect. 10 5
229 49.75 wind 9.0 270 < th dose independent rect. 15 19
240 49.78 precipitation 0.1 90 < th dose independent rect. 17 18
241 49.78 precipitation 0.1 90 < th dose dependent rect. 17 18
252 49.82 radiation 1.0 270 < th dose dependent rect. 19 10
255 49.83 radiation 1.0 270 < th dose independent rect. 19 10
262 49.84 atmosphere 1015.0 270 < th dose independent rect. 10 5
263 49.84 temperature 10.0 270 > th dose independent rect. 19 10
264 49.84 temperature 30.0 270 < th dose independent rect. 19 10
266 49.84 atmosphere 995.0 270 > th dose independent rect. 19 10
270 49.84 temperature 10.0 270 > th dose independent rect. 5 14
271 49.84 atmosphere 1015.0 270 < th dose independent rect. 5 14
274 49.84 temperature 10.0 270 > th dose independent rect. 15 19
279 49.85 wind 9.0 270 < th dose independent rect. 19 10
300 49.92 precipitation 0.1 270 < th dose independent rect. 10 5
301 49.92 precipitation 0.1 270 < th dose dependent rect. 10 5
304 49.93 radiation 20.0 10 < th dose dependent sin 8 NA
307 49.93 radiation 1.0 270 < th dose dependent rect. 11 18
320 49.96 humidity 50.0 90 > th dose independent rect. 11 6
325 49.97 temperature 25.0 90 > th dose independent rect. 17 17
335 49.99 radiation 10.0 10 < th dose dependent sin 6 NA
341 50.01 radiation 1.0 270 < th dose dependent rect. 17 12
357 50.04 temperature 30.0 10 < th dose independent rect. 12 6
366 50.06 atmosphere 995.0 270 > th dose independent rect. 15 19
371 50.09 temperature 25.0 270 > th dose independent rect. 15 7
372 50.09 humidity 50.0 270 > th dose dependent rect. 19 10
379 50.11 precipitation 0.1 270 < th dose independent rect. 15 8
381 50.11 precipitation 0.1 270 < th dose dependent rect. 15 8
407 50.17 atmosphere 995.0 270 > th dose independent rect. 10 5
408 50.17 radiation 1.0 90 > th dose independent rect. 17 20
422 50.21 wind 9.0 270 < th dose independent rect. 5 14
423 50.21 humidity 50.0 270 > th dose independent rect. 8 22
429 50.22 wind 1.0 270 > th dose independent rect. 24 15
433 50.24 precipitation 0.1 270 < th dose independent rect. 14 21
436 50.24 precipitation 0.1 270 < th dose dependent rect. 14 21
443 50.27 atmosphere 995.0 270 > th dose independent rect. 5 14
444 50.27 atmosphere 995.0 90 > th dose independent rect. 17 18
445 50.27 radiation 10.0 90 < th dose dependent sin 9 NA
448 50.28 temperature 30.0 270 < th dose independent rect. 23 16
461 50.30 temperature 30.0 10 < th dose dependent rect. 24 18
476 50.34 radiation 10.0 14400 < th dose dependent rect. 19 7
479 50.35 precipitation 0.1 270 < th dose independent rect. 19 10
482 50.35 precipitation 0.1 270 < th dose dependent rect. 19 10
491 50.37 radiation 1.0 270 < th dose independent rect. 17 12
503 50.39 humidity 60.0 90 > th dose independent rect. 12 18
523 50.43 temperature 15.0 270 > th dose independent rect. 10 17
530 50.44 radiation 1.0 270 < th dose independent rect. 11 18
557 50.48 temperature 15.0 270 > th dose independent rect. 9 20
563 50.49 radiation 1.0 270 > th dose independent rect. 10 5
567 50.49 temperature 10.0 90 > th dose independent rect. 17 18
569 50.49 radiation 1.0 14400 < th dose dependent rect. 19 2
582 50.51 radiation 10.0 90 < th dose dependent rect. 23 18
620 50.58 temperature 15.0 270 > th dose independent rect. 23 16
631 50.59 radiation 40.0 270 < th dose independent rect. 15 19
643 50.60 precipitation 0.1 270 < th dose independent rect. 3 7
646 50.60 precipitation 0.1 270 < th dose dependent rect. 3 7
660 50.62 wind 1.0 270 > th dose independent rect. 15 8
673 50.63 temperature 30.0 10 < th dose dependent rect. 12 6
695 50.66 temperature 15.0 10 > th dose dependent rect. 5 23
715 50.68 wind 1.0 270 > th dose independent rect. 11 3
731 50.69 radiation 1.0 10 > th dose dependent sin 9 NA
732 50.69 radiation 1.0 14400 < th dose dependent rect. 19 5
763 50.72 humidity 50.0 270 > th dose dependent rect. 11 17
772 50.73 radiation 1.0 90 < th dose independent rect. 20 22
780 50.74 temperature 10.0 270 > th dose independent rect. 3 7
781 50.74 atmosphere 995.0 270 > th dose independent rect. 3 7
782 50.74 atmosphere 1015.0 270 < th dose independent rect. 3 7
790 50.75 radiation 40.0 270 < th dose independent rect. 5 4
804 50.77 wind 9.0 270 < th dose independent rect. 3 7
813 50.78 humidity 50.0 270 > th dose independent rect. 3 7
814 50.78 wind 9.0 270 < th dose independent rect. 10 17
819 50.79 radiation 1.0 90 > th dose independent rect. 4 7
833 50.79 wind 3.0 4320 > th dose dependent rect. 20 1
845 50.81 atmosphere 1005.0 14400 < th dose independent rect. 22 2
847 50.81 atmosphere 1005.0 14400 < th dose independent rect. 21 4
868 50.83 wind 9.0 43200 > th dose dependent rect. 18 12
874 50.84 humidity 50.0 270 > th dose dependent rect. 5 4
878 50.84 humidity 50.0 10 > th dose dependent rect. 13 17
895 50.86 wind 9.0 270 < th dose independent rect. 5 4
896 50.86 temperature 10.0 270 > th dose independent rect. 5 4
898 50.86 humidity 50.0 270 > th dose independent rect. 5 4
899 50.86 atmosphere 995.0 270 > th dose independent rect. 5 4
900 50.86 atmosphere 1015.0 270 < th dose independent rect. 5 4
901 50.86 precipitation 0.1 270 < th dose independent rect. 5 4
905 50.86 precipitation 0.1 270 < th dose dependent rect. 5 4
913 50.87 wind 9.0 270 < th dose independent rect. 9 20
916 50.87 temperature 10.0 270 > th dose dependent rect. 3 7
917 50.87 wind 9.0 270 < th dose dependent rect. 3 8
924 50.88 wind 9.0 270 < th dose dependent rect. 4 6
940 50.90 humidity 60.0 270 > th dose independent rect. 11 3
960 50.91 precipitation 0.1 14400 > th dose dependent rect. 20 2
965 50.92 atmosphere 995.0 14400 > th dose independent rect. 8 5