Os07g0558300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Inositol monophosphatase family protein.
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Os07g0558300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Inositol monophosphatase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 160 | 0.594 | 12 | -1.76 | 2.46 | -1.46 | 2.61 | -0.763 | -0.513 | 8.72 | 76.97 | 1386 | -- | -- |
| 160.1 | 0.589 | 12 | -1.82 | 2.51 | -1.34 | 2.74 | -- | -0.548 | 8.72 | 75.96 | 1358 | -- | -- |
| 182.42 | 0.629 | 12 | -1.65 | 2.45 | -1.4 | -- | -0.953 | -0.505 | 8.63 | 76.71 | 1419 | -- | -- |
| 182.81 | 0.63 | 12 | -1.78 | 2.47 | -1.35 | -- | -- | -0.553 | 8.73 | 75.79 | 1355 | -- | -- |
| 517.14 | 1.06 | 12.1 | -1.67 | -- | -1.78 | -- | -0.761 | -0.482 | -- | 77 | 1445 | -- | -- |
| 194.49 | 0.654 | 12 | -1.71 | 2.49 | -- | 2.58 | -- | -0.433 | 8.57 | -- | -- | -- | -- |
| 216.11 | 0.688 | 12 | -1.63 | 2.48 | -- | -- | -- | -0.433 | 8.56 | -- | -- | -- | -- |
| 517.68 | 1.06 | 12.1 | -1.74 | -- | -1.81 | -- | -- | -0.493 | -- | 77 | 1443 | -- | -- |
| 251.52 | 0.739 | 11.9 | -- | 2.47 | -1.46 | -- | -- | -0.279 | 9.01 | 84 | 1317 | -- | -- |
| 561.35 | 1.11 | 12.1 | -1.62 | -- | -- | -- | -- | -0.41 | -- | -- | -- | -- | -- |
| 286.21 | 0.791 | 12 | -- | 2.47 | -- | -- | -- | -0.251 | 8.61 | -- | -- | -- | -- |
| 585.07 | 1.13 | 12.1 | -- | -- | -1.83 | -- | -- | -0.351 | -- | 83.49 | 1448 | -- | -- |
| 630.74 | 1.17 | 12 | -- | -- | -- | -- | -- | -0.23 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 151.37 | humidity | 50 | 720 | > th | dose dependent | rect. | 18 | 8 |
| 3 | 152.84 | humidity | 70 | 720 | > th | dose dependent | rect. | 19 | 2 |
| 11 | 154.03 | humidity | 90 | 720 | < th | dose dependent | rect. | 20 | 3 |
| 12 | 154.22 | humidity | 90 | 720 | < th | dose dependent | rect. | 19 | 5 |
| 21 | 155.25 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 9 |
| 24 | 155.35 | humidity | 90 | 720 | < th | dose independent | rect. | 21 | 3 |
| 60 | 156.72 | humidity | 90 | 720 | < th | dose dependent | rect. | 17 | 15 |
| 68 | 157.09 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 11 |
| 72 | 157.13 | humidity | 60 | 720 | > th | dose dependent | sin | 13 | NA |
| 97 | 157.68 | humidity | 50 | 720 | > th | dose dependent | rect. | 16 | 14 |
| 112 | 157.85 | humidity | 60 | 720 | > th | dose dependent | rect. | 16 | 16 |
| 114 | 157.95 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 11 |
| 176 | 158.82 | humidity | 80 | 720 | > th | dose dependent | rect. | 5 | 20 |
| 180 | 158.90 | humidity | 80 | 1440 | < th | dose independent | sin | 1 | NA |
| 183 | 158.90 | humidity | 80 | 720 | > th | dose dependent | rect. | 9 | 16 |
| 225 | 159.29 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 15 |
| 228 | 159.30 | humidity | 80 | 720 | > th | dose dependent | rect. | 7 | 18 |
| 229 | 159.32 | humidity | 90 | 720 | > th | dose independent | rect. | 20 | 4 |
| 268 | 159.62 | humidity | 80 | 1440 | > th | dose independent | sin | 0 | NA |
| 271 | 159.67 | humidity | 90 | 720 | < th | dose dependent | sin | 12 | NA |
| 278 | 159.73 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 16 |
| 316 | 159.96 | humidity | 90 | 720 | > th | dose independent | rect. | 21 | 2 |
| 341 | 160.12 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 374 | 160.34 | humidity | 80 | 720 | > th | dose independent | rect. | 15 | 7 |
| 428 | 160.69 | humidity | 80 | 720 | > th | dose independent | rect. | 18 | 3 |
| 466 | 160.86 | humidity | 90 | 720 | < th | dose independent | rect. | 17 | 7 |
| 490 | 161.01 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 507 | 161.12 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 12 |
| 517 | 161.18 | temperature | 25 | 720 | > th | dose dependent | rect. | 21 | 3 |
| 529 | 161.25 | humidity | 70 | 720 | > th | dose dependent | rect. | 11 | 21 |
| 556 | 161.38 | humidity | 70 | 1440 | > th | dose dependent | rect. | 19 | 22 |
| 559 | 161.40 | radiation | 1 | 1440 | < th | dose dependent | sin | 23 | NA |
| 632 | 161.69 | humidity | 80 | 1440 | > th | dose independent | rect. | 20 | 21 |
| 645 | 161.73 | humidity | 80 | 1440 | < th | dose independent | rect. | 20 | 21 |
| 670 | 161.84 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 673 | 161.84 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 696 | 161.92 | radiation | 1 | 1440 | < th | dose dependent | rect. | 19 | 22 |
| 740 | 162.08 | radiation | 1 | 1440 | < th | dose dependent | rect. | 2 | 15 |
| 750 | 162.10 | humidity | 70 | 1440 | > th | dose dependent | no | NA | NA |
| 756 | 162.11 | humidity | 70 | 1440 | > th | dose dependent | rect. | 22 | 23 |
| 820 | 162.35 | humidity | 80 | 720 | > th | dose independent | rect. | 11 | 11 |
| 896 | 162.54 | humidity | 80 | 720 | > th | dose independent | sin | 17 | NA |
| 897 | 162.54 | radiation | 1 | 4320 | > th | dose independent | rect. | 12 | 5 |
| 917 | 162.63 | radiation | 1 | 4320 | < th | dose independent | rect. | 12 | 5 |
| 944 | 162.69 | radiation | 20 | 14400 | > th | dose dependent | rect. | 16 | 2 |
| 962 | 162.70 | radiation | 1 | 4320 | > th | dose independent | rect. | 9 | 8 |
| 979 | 162.74 | radiation | 1 | 4320 | < th | dose independent | rect. | 9 | 8 |
| 993 | 162.79 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 14 |
| 995 | 162.79 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 16 |
| 996 | 162.79 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 18 |