Os07g0558200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Inositol monophosphatase family protein.
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Os07g0558200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Inositol monophosphatase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 56.97 | 0.355 | 11.1 | -1.87 | 1.26 | -1.15 | 1.55 | 0.383 | -0.656 | 7.13 | 20.6 | 2696 | -- | -- |
| 57.24 | 0.352 | 11.1 | -1.95 | 1.26 | -1.2 | 1.61 | -- | -0.673 | 7.1 | 20.6 | 2695 | -- | -- |
| 63.26 | 0.37 | 11.1 | -1.81 | 1.26 | -1.16 | -- | 0.451 | -0.65 | 7.23 | 20.54 | 2714 | -- | -- |
| 63.64 | 0.372 | 11.1 | -1.9 | 1.26 | -1.22 | -- | -- | -0.674 | 7.23 | 20.5 | 2710 | -- | -- |
| 143.45 | 0.558 | 11.1 | -1.95 | -- | -1.25 | -- | 0.0132 | -0.668 | -- | 20.69 | 2213 | -- | -- |
| 89.96 | 0.445 | 11.1 | -2.6 | 1.24 | -- | 1.63 | -- | -1 | 7.29 | -- | -- | -- | -- |
| 97.02 | 0.461 | 11.1 | -2.56 | 1.24 | -- | -- | -- | -1 | 7.43 | -- | -- | -- | -- |
| 143.37 | 0.558 | 11.1 | -1.93 | -- | -1.28 | -- | -- | -0.666 | -- | 20.58 | 2218 | -- | -- |
| 80.02 | 0.417 | 11 | -- | 1.24 | -2.24 | -- | -- | -0.207 | 7.34 | 18 | 47520 | -- | -- |
| 179.42 | 0.626 | 11.2 | -2.54 | -- | -- | -- | -- | -0.984 | -- | -- | -- | -- | -- |
| 270.27 | 0.769 | 11.1 | -- | 1.22 | -- | -- | -- | -0.719 | 7.57 | -- | -- | -- | -- |
| 161.75 | 0.592 | 11 | -- | -- | -2.19 | -- | -- | -0.185 | -- | 18.33 | 47520 | -- | -- |
| 350.16 | 0.873 | 11.1 | -- | -- | -- | -- | -- | -0.702 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 54.83 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 4 | 55.34 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 5 | 55.45 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 9 |
| 9 | 55.56 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 9 |
| 17 | 55.73 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 20 | 55.79 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 27 | 55.93 | temperature | 20 | 4320 | < th | dose independent | rect. | 19 | 5 |
| 39 | 56.14 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 3 |
| 45 | 56.25 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 5 |
| 55 | 56.34 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 185 | 57.74 | temperature | 20 | 1440 | > th | dose independent | sin | 10 | NA |
| 201 | 57.94 | temperature | 20 | 1440 | < th | dose independent | sin | 10 | NA |
| 268 | 58.50 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 292 | 58.69 | temperature | 20 | 4320 | > th | dose independent | sin | 14 | NA |
| 346 | 59.06 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 4 |
| 372 | 59.21 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 7 |
| 403 | 59.40 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 3 |
| 621 | 60.26 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 710 | 60.58 | temperature | 25 | 1440 | < th | dose dependent | sin | 11 | NA |