Os07g0556200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Rieske iron-sulfur protein family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0556200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Rieske iron-sulfur protein family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 72.16 | 0.399 | 15.2 | -0.0951 | 0.0476 | -0.785 | -0.147 | -1.64 | -0.378 | 17.1 | 21.44 | 1446 | -- | -- |
| 75.98 | 0.406 | 15.2 | 0.268 | 0.0401 | -0.61 | -0.156 | -- | -0.256 | 17.3 | 22.42 | 1390 | -- | -- |
| 72.21 | 0.396 | 15.2 | -0.0944 | 0.0472 | -0.785 | -- | -1.63 | -0.377 | 17.5 | 21.4 | 1450 | -- | -- |
| 76 | 0.406 | 15.2 | 0.263 | 0.0457 | -0.606 | -- | -- | -0.262 | 20.3 | 22.47 | 1337 | -- | -- |
| 72.33 | 0.396 | 15.2 | -0.0952 | -- | -0.788 | -- | -1.63 | -0.379 | -- | 21.4 | 1445 | -- | -- |
| 90.99 | 0.447 | 15.2 | 0.0542 | 0.0645 | -- | -0.157 | -- | -0.475 | 16.8 | -- | -- | -- | -- |
| 91.05 | 0.447 | 15.2 | 0.0534 | 0.0642 | -- | -- | -- | -0.475 | 17.2 | -- | -- | -- | -- |
| 76.11 | 0.406 | 15.2 | 0.267 | -- | -0.611 | -- | -- | -0.261 | -- | 22.46 | 1392 | -- | -- |
| 77.69 | 0.411 | 15.2 | -- | 0.0561 | -0.553 | -- | -- | -0.313 | 20.6 | 22.4 | 1261 | -- | -- |
| 91.26 | 0.446 | 15.2 | 0.0512 | -- | -- | -- | -- | -0.477 | -- | -- | -- | -- | -- |
| 91.12 | 0.447 | 15.2 | -- | 0.0633 | -- | -- | -- | -0.481 | 17.2 | -- | -- | -- | -- |
| 77.84 | 0.411 | 15.2 | -- | -- | -0.552 | -- | -- | -0.309 | -- | 22.4 | 1364 | -- | -- |
| 91.33 | 0.446 | 15.2 | -- | -- | -- | -- | -- | -0.483 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 70.28 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 18 | 71.21 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 29 | 71.62 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 11 |
| 101 | 71.98 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 161 | 72.18 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 2 |
| 537 | 73.53 | temperature | 25 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 545 | 73.56 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 567 | 73.62 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 591 | 73.71 | temperature | 15 | 1440 | > th | dose dependent | sin | 11 | NA |
| 614 | 73.76 | temperature | 25 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 682 | 73.96 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 3 |
| 684 | 73.97 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 691 | 73.98 | temperature | 15 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 712 | 74.04 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 19 |
| 719 | 74.07 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 3 |
| 721 | 74.08 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |