Os07g0551700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cellulose synthase (Fragment).
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Os07g0551700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cellulose synthase (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 202.56 | 0.663 | 5750 | -35100 | 0.282 | 1440000 | -0.27 | -8820000 | -0.135 | 23.3 | 995 | 90 | -- | -- |
| 211.7 | 0.683 | 3.01 | 0.103 | 0.288 | 2.67 | -0.261 | -- | -0.14 | 23.1 | 995 | 90 | -- | -- |
| 202.87 | 0.663 | 5750 | -35100 | 0.283 | 1440000 | -- | -8820000 | -0.134 | 23.4 | 995 | 90 | -- | -- |
| 200.02 | 0.659 | 3.01 | 0.0725 | 0.299 | 3.78 | -- | -- | -0.115 | 23.7 | 995 | 151 | -- | -- |
| 207.9 | 0.672 | 5750 | -35100 | -- | 1440000 | -- | -8820000 | -0.131 | -- | 995 | 90 | -- | -- |
| 219.54 | 0.695 | 3.02 | 0.123 | 0.288 | -- | -0.263 | -- | -0.147 | 22.7 | -- | -- | -- | -- |
| 219.83 | 0.694 | 3.02 | 0.134 | 0.289 | -- | -- | -- | -0.146 | 22.6 | -- | -- | -- | -- |
| 204.49 | 0.666 | 3 | 0.103 | -- | 4.05 | -- | -- | -0.129 | -- | 995 | 160 | -- | -- |
| 200.12 | 0.659 | 3.02 | -- | 0.275 | 4.04 | -- | -- | -0.125 | 23.5 | 995 | 156 | -- | -- |
| 224.99 | 0.701 | 3.01 | 0.139 | -- | -- | -- | -- | -0.144 | -- | -- | -- | -- | -- |
| 220.3 | 0.694 | 3.02 | -- | 0.29 | -- | -- | -- | -0.161 | 22.7 | -- | -- | -- | -- |
| 204.77 | 0.666 | 3.01 | -- | -- | 4.06 | -- | -- | -0.14 | -- | 995 | 160 | -- | -- |
| 225.5 | 0.701 | 3.01 | -- | -- | -- | -- | -- | -0.16 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 189.24 | wind | 1 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 2 | 190.12 | wind | 1 | 90 | < th | dose independent | rect. | 4 | 1 |
| 6 | 197.86 | wind | 1 | 90 | < th | dose dependent | rect. | 4 | 6 |
| 8 | 198.58 | atmosphere | 1000 | 270 | < th | dose dependent | rect. | 14 | 3 |
| 14 | 199.74 | atmosphere | 995 | 90 | > th | dose independent | sin | 8 | NA |
| 21 | 200.34 | atmosphere | 995 | 90 | > th | dose independent | sin | 12 | NA |
| 29 | 200.63 | atmosphere | 995 | 270 | > th | dose independent | rect. | 5 | 23 |
| 30 | 200.72 | atmosphere | 995 | 270 | > th | dose independent | sin | 4 | NA |
| 32 | 200.78 | temperature | 30 | 270 | > th | dose dependent | sin | 12 | NA |
| 34 | 200.88 | atmosphere | 995 | 10 | > th | dose independent | sin | 11 | NA |
| 44 | 201.13 | temperature | 30 | 270 | > th | dose dependent | rect. | 14 | 5 |
| 90 | 201.41 | wind | 1 | 720 | < th | dose dependent | rect. | 4 | 1 |
| 93 | 201.45 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 16 | 2 |
| 106 | 201.82 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 17 | 2 |
| 133 | 202.41 | temperature | 30 | 30 | > th | dose independent | rect. | 17 | 1 |
| 231 | 202.80 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 17 | 1 |
| 277 | 203.18 | temperature | 30 | 10 | < th | dose independent | sin | 12 | NA |
| 304 | 203.43 | temperature | 30 | 10 | > th | dose independent | sin | 12 | NA |
| 381 | 204.11 | humidity | 70 | 30 | < th | dose independent | rect. | 18 | 1 |
| 461 | 204.73 | radiation | 10 | 90 | > th | dose dependent | rect. | 17 | 1 |
| 486 | 205.12 | radiation | 10 | 90 | > th | dose independent | rect. | 17 | 1 |
| 524 | 205.21 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 14 | 3 |
| 530 | 205.26 | atmosphere | 995 | 270 | < th | dose independent | sin | 5 | NA |
| 547 | 205.29 | atmosphere | 995 | 30 | > th | dose independent | rect. | 23 | 23 |
| 557 | 205.36 | atmosphere | 995 | 270 | < th | dose dependent | sin | 6 | NA |
| 581 | 205.39 | atmosphere | 995 | 10 | > th | dose independent | rect. | 7 | 23 |
| 599 | 205.63 | atmosphere | 995 | 90 | < th | dose independent | sin | 8 | NA |
| 618 | 205.67 | atmosphere | 995 | 90 | < th | dose independent | rect. | 17 | 22 |
| 620 | 205.71 | atmosphere | 995 | 10 | < th | dose dependent | sin | 10 | NA |
| 629 | 205.78 | atmosphere | 995 | 90 | < th | dose dependent | sin | 12 | NA |
| 630 | 205.79 | radiation | 1 | 90 | < th | dose independent | rect. | 4 | 15 |
| 636 | 205.84 | atmosphere | 995 | 10 | < th | dose independent | sin | 11 | NA |
| 642 | 205.88 | atmosphere | 995 | 90 | < th | dose independent | sin | 12 | NA |
| 685 | 206.04 | wind | 1 | 90 | < th | dose independent | rect. | 4 | 6 |
| 694 | 206.11 | atmosphere | 995 | 30 | > th | dose independent | rect. | 21 | 23 |
| 718 | 206.19 | wind | 1 | 1440 | < th | dose independent | rect. | 4 | 1 |
| 726 | 206.23 | wind | 1 | 90 | < th | dose dependent | sin | 5 | NA |
| 728 | 206.24 | humidity | 70 | 90 | > th | dose independent | rect. | 19 | 9 |
| 767 | 206.30 | atmosphere | 995 | 10 | > th | dose independent | rect. | 9 | 23 |
| 791 | 206.44 | atmosphere | 995 | 90 | < th | dose dependent | rect. | 17 | 22 |
| 795 | 206.49 | atmosphere | 995 | 270 | > th | dose independent | rect. | 17 | 23 |
| 896 | 206.68 | temperature | 30 | 90 | < th | dose dependent | rect. | 18 | 10 |
| 934 | 206.77 | radiation | 1 | 90 | < th | dose dependent | rect. | 5 | 12 |
| 941 | 206.83 | atmosphere | 995 | 30 | > th | dose independent | rect. | 11 | 23 |