Os07g0550900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Receptor-like protein kinase 6.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0550900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Receptor-like protein kinase 6.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 377.27 | 0.913 | 4.38 | 1.56 | 2.61 | -2.32 | 0.082 | 2.14 | 0.442 | 0.533 | 24.95 | 1341 | -- | -- |
| 379.37 | 0.907 | 4.44 | 1.03 | 2.62 | -2.13 | 0.429 | -- | 0.343 | 0.504 | 24.68 | 1337 | -- | -- |
| 377.28 | 0.905 | 4.38 | 1.59 | 2.61 | -2.34 | -- | 2.25 | 0.463 | 0.542 | 24.85 | 1338 | -- | -- |
| 379.06 | 0.907 | 4.45 | 0.983 | 2.61 | -2.13 | -- | -- | 0.317 | 0.548 | 24.72 | 1340 | -- | -- |
| 570.48 | 1.12 | 4.29 | 1.49 | -- | -3.78 | -- | 3.5 | 0.723 | -- | 22.93 | 1607 | -- | -- |
| 550.35 | 1.1 | 4.51 | 0.266 | 2.34 | -- | -0.139 | -- | 0.0339 | 0.359 | -- | -- | -- | -- |
| 550.43 | 1.1 | 4.51 | 0.271 | 2.34 | -- | -- | -- | 0.0347 | 0.351 | -- | -- | -- | -- |
| 571.19 | 1.12 | 4.34 | 1.01 | -- | -3.6 | -- | -- | 0.604 | -- | 22.39 | 1620 | -- | -- |
| 402.46 | 0.934 | 4.47 | -- | 2.58 | -1.91 | -- | -- | 0.184 | 0.524 | 25 | 1321 | -- | -- |
| 894.51 | 1.4 | 4.46 | 0.35 | -- | -- | -- | -- | 0.072 | -- | -- | -- | -- | -- |
| 552.37 | 1.1 | 4.52 | -- | 2.34 | -- | -- | -- | 0.0045 | 0.357 | -- | -- | -- | -- |
| 596.95 | 1.14 | 4.37 | -- | -- | -3.42 | -- | -- | 0.469 | -- | 22.39 | 1620 | -- | -- |
| 897.74 | 1.4 | 4.47 | -- | -- | -- | -- | -- | 0.0332 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 366.13 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 2 | 366.97 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 4 |
| 144 | 375.64 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 14 |
| 152 | 375.80 | temperature | 25 | 1440 | > th | dose dependent | sin | 20 | NA |
| 218 | 377.19 | temperature | 25 | 1440 | > th | dose dependent | rect. | 24 | 18 |
| 419 | 380.29 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |