Os07g0549700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ATPase, V1 complex, subunit H family protein.
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Os07g0549700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ATPase, V1 complex, subunit H family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 12.68 | 0.167 | 12.8 | -0.567 | 0.579 | -0.297 | 0.0552 | 0.179 | -0.0362 | 3.63 | 12.64 | 10 | -- | -- |
| 12.73 | 0.167 | 12.8 | -0.572 | 0.571 | -0.298 | 0.193 | -- | -0.0332 | 3.57 | 12.64 | 10 | -- | -- |
| 12.62 | 0.167 | 12.8 | -0.57 | 0.565 | -0.287 | -- | 0.193 | -0.0336 | 3.66 | 12.48 | 10 | -- | -- |
| 12.84 | 0.168 | 12.8 | -0.575 | 0.564 | -0.283 | -- | -- | -0.034 | 3.7 | 12.64 | 10 | -- | -- |
| 25.78 | 0.238 | 12.8 | -0.55 | -- | -0.0661 | -- | 0.208 | -0.0173 | -- | 12.48 | 10 | -- | -- |
| 14.23 | 0.177 | 12.8 | -0.57 | 0.485 | -- | -0.0121 | -- | -0.0288 | 5.91 | -- | -- | -- | -- |
| 14.23 | 0.177 | 12.8 | -0.571 | 0.485 | -- | -- | -- | -0.0288 | 5.91 | -- | -- | -- | -- |
| 25.97 | 0.238 | 12.8 | -0.554 | -- | -0.0671 | -- | -- | -0.0188 | -- | 7.74 | 7 | -- | -- |
| 21.41 | 0.215 | 12.8 | -- | 0.565 | -0.281 | -- | -- | 0.0303 | 3.65 | 10 | 8 | -- | -- |
| 26.42 | 0.24 | 12.8 | -0.556 | -- | -- | -- | -- | -0.0176 | -- | -- | -- | -- | -- |
| 22.81 | 0.223 | 12.8 | -- | 0.476 | -- | -- | -- | 0.0348 | 5.97 | -- | -- | -- | -- |
| 34.06 | 0.273 | 12.8 | -- | -- | -0.0723 | -- | -- | 0.0432 | -- | 9.587 | 6 | -- | -- |
| 34.58 | 0.274 | 12.8 | -- | -- | -- | -- | -- | 0.0441 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 12.00 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 19 | 7 |
| 5 | 12.29 | radiation | 30.0 | 30 | < th | dose dependent | rect. | 1 | 11 |
| 8 | 12.31 | radiation | 10.0 | 30 | < th | dose independent | rect. | 1 | 17 |
| 9 | 12.32 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 1 | 17 |
| 29 | 12.40 | radiation | 10.0 | 30 | < th | dose independent | rect. | 1 | 13 |
| 32 | 12.41 | radiation | 20.0 | 30 | < th | dose independent | rect. | 1 | 11 |
| 36 | 12.43 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 18 | 5 |
| 43 | 12.44 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 19 | 3 |
| 61 | 12.47 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 1 | 9 |
| 80 | 12.51 | radiation | 10.0 | 270 | < th | dose independent | rect. | 22 | 20 |
| 100 | 12.53 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 103 | 12.54 | radiation | 10.0 | 10 | < th | dose dependent | sin | 2 | NA |
| 123 | 12.57 | wind | 7.0 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 124 | 12.57 | radiation | 10.0 | 270 | < th | dose independent | rect. | 23 | 12 |
| 131 | 12.57 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 22 | 20 |
| 143 | 12.59 | radiation | 10.0 | 30 | < th | dose independent | rect. | 23 | 23 |
| 170 | 12.62 | wind | 1.0 | 90 | > th | dose independent | rect. | 1 | 18 |
| 175 | 12.63 | wind | 7.0 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 179 | 12.63 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 1 | 6 |
| 186 | 12.64 | wind | 5.0 | 43200 | < th | dose independent | rect. | 19 | 5 |
| 187 | 12.64 | wind | 1.0 | 43200 | < th | dose independent | rect. | 23 | 10 |
| 191 | 12.64 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 17 | 20 |
| 194 | 12.64 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 19 | 4 |
| 196 | 12.64 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 5 |
| 202 | 12.65 | wind | 5.0 | 43200 | > th | dose independent | rect. | 19 | 5 |
| 203 | 12.65 | wind | 5.0 | 43200 | > th | dose independent | rect. | 18 | 8 |
| 204 | 12.65 | wind | 5.0 | 43200 | < th | dose independent | rect. | 18 | 8 |
| 208 | 12.65 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 17 | 20 |
| 213 | 12.65 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 19 | 14 |
| 220 | 12.66 | temperature | 25.0 | 270 | > th | dose independent | rect. | 19 | 3 |
| 222 | 12.66 | wind | 7.0 | 43200 | > th | dose independent | rect. | 17 | 5 |
| 223 | 12.66 | wind | 7.0 | 43200 | < th | dose independent | rect. | 17 | 5 |
| 241 | 12.67 | wind | 5.0 | 43200 | < th | dose independent | rect. | 17 | 14 |
| 242 | 12.67 | wind | 1.0 | 270 | > th | dose independent | rect. | 23 | 19 |
| 243 | 12.67 | radiation | 40.0 | 30 | < th | dose dependent | sin | 7 | NA |
| 244 | 12.67 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 260 | 12.68 | wind | 1.0 | 43200 | > th | dose independent | rect. | 23 | 10 |
| 263 | 12.68 | wind | 5.0 | 43200 | > th | dose independent | rect. | 17 | 14 |
| 302 | 12.69 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 306 | 12.69 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 23 | 9 |
| 315 | 12.70 | wind | 1.0 | 90 | > th | dose independent | rect. | 1 | 5 |
| 321 | 12.70 | humidity | 70.0 | 30 | > th | dose independent | rect. | 18 | 7 |
| 323 | 12.70 | wind | 1.0 | 43200 | < th | dose independent | rect. | 23 | 8 |
| 339 | 12.70 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 17 | 11 |
| 342 | 12.71 | wind | 1.0 | 43200 | < th | dose independent | sin | 9 | NA |
| 343 | 12.71 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 360 | 12.71 | radiation | 1.0 | 30 | > th | dose dependent | sin | 7 | NA |
| 366 | 12.71 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 20 | 5 |
| 384 | 12.71 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 424 | 12.73 | humidity | 70.0 | 1440 | > th | dose independent | sin | 9 | NA |
| 427 | 12.73 | humidity | 90.0 | 270 | < th | dose independent | rect. | 18 | 5 |
| 429 | 12.73 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 9 | 9 |
| 433 | 12.73 | humidity | 70.0 | 30 | > th | dose independent | rect. | 1 | 17 |
| 440 | 12.73 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 460 | 12.74 | humidity | 70.0 | 1440 | < th | dose independent | sin | 9 | NA |
| 461 | 12.74 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 466 | 12.74 | wind | 1.0 | 43200 | < th | dose independent | rect. | 18 | 16 |
| 477 | 12.74 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 1 | 7 |
| 480 | 12.74 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 11 |
| 493 | 12.75 | wind | 1.0 | 43200 | < th | dose independent | rect. | 23 | 6 |
| 494 | 12.75 | temperature | 20.0 | 270 | > th | dose independent | rect. | 9 | 9 |
| 502 | 12.75 | wind | 1.0 | 43200 | < th | dose independent | rect. | 15 | 16 |
| 505 | 12.75 | wind | 1.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 541 | 12.76 | temperature | 30.0 | 30 | < th | dose independent | rect. | 18 | 7 |
| 559 | 12.76 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 1 | 18 |
| 578 | 12.76 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 19 | 13 |
| 584 | 12.77 | wind | 5.0 | 43200 | < th | dose independent | sin | 12 | NA |
| 610 | 12.77 | radiation | 10.0 | 10 | < th | dose dependent | no | NA | NA |
| 637 | 12.77 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 638 | 12.77 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 639 | 12.77 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 693 | 12.79 | wind | 5.0 | 43200 | > th | dose independent | sin | 12 | NA |
| 710 | 12.79 | radiation | 10.0 | 30 | < th | dose independent | rect. | 1 | 23 |
| 738 | 12.79 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 742 | 12.80 | radiation | 10.0 | 30 | < th | dose independent | sin | 3 | NA |
| 746 | 12.80 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 8 | 3 |
| 749 | 12.80 | temperature | 20.0 | 720 | > th | dose independent | rect. | 6 | 5 |
| 766 | 12.80 | humidity | 70.0 | 30 | > th | dose independent | rect. | 1 | 13 |
| 779 | 12.80 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 8 | 5 |
| 810 | 12.81 | wind | 1.0 | 43200 | > th | dose independent | sin | 8 | NA |
| 815 | 12.81 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 816 | 12.81 | wind | 1.0 | 43200 | < th | dose independent | rect. | 5 | 4 |
| 829 | 12.81 | wind | 1.0 | 43200 | > th | dose independent | rect. | 18 | 15 |
| 857 | 12.81 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 15 | 6 |
| 867 | 12.81 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 13 | 12 |
| 881 | 12.82 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 885 | 12.82 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 893 | 12.82 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 4 | 9 |
| 899 | 12.82 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 13 |
| 910 | 12.82 | radiation | 40.0 | 30 | < th | dose independent | rect. | 1 | 18 |
| 913 | 12.82 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 21 | 19 |
| 918 | 12.82 | wind | 3.0 | 43200 | > th | dose dependent | sin | 12 | NA |
| 924 | 12.82 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 925 | 12.82 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 2 |
| 962 | 12.83 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 964 | 12.83 | wind | 5.0 | 270 | < th | dose independent | rect. | 19 | 3 |
| 968 | 12.83 | wind | 5.0 | 270 | < th | dose independent | rect. | 18 | 5 |
| 969 | 12.83 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 7 | 6 |
| 970 | 12.83 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 19 | 7 |
| 973 | 12.83 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 19 | 7 |
| 978 | 12.83 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 19 | 7 |
| 980 | 12.83 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 19 | 7 |
| 981 | 12.83 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 19 | 7 |