Os07g0549100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0549100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 107.16 | 0.486 | 2.83 | 0.246 | 0.116 | 0.509 | 0.339 | 0.601 | 0.195 | 7.94 | 24.8 | 1401 | -- | -- |
| 107.63 | 0.483 | 2.81 | 0.415 | 0.101 | 0.52 | 0.359 | -- | 0.24 | 8.04 | 24.71 | 1400 | -- | -- |
| 107.5 | 0.483 | 2.83 | 0.251 | 0.116 | 0.508 | -- | 0.61 | 0.194 | 7.94 | 24.78 | 1400 | -- | -- |
| 107.94 | 0.484 | 2.81 | 0.441 | 0.117 | 0.549 | -- | -- | 0.254 | 7.87 | 24.8 | 1400 | -- | -- |
| 108.23 | 0.485 | 2.83 | 0.258 | -- | 0.503 | -- | 0.593 | 0.196 | -- | 24.8 | 1400 | -- | -- |
| 116.77 | 0.507 | 2.85 | 0.244 | 0.111 | -- | 0.305 | -- | 0.0613 | 9.49 | -- | -- | -- | -- |
| 117.11 | 0.507 | 2.85 | 0.255 | 0.109 | -- | -- | -- | 0.0621 | 9.9 | -- | -- | -- | -- |
| 108.68 | 0.486 | 2.81 | 0.44 | -- | 0.542 | -- | -- | 0.253 | -- | 24.76 | 1400 | -- | -- |
| 112.6 | 0.494 | 2.83 | -- | 0.115 | 0.433 | -- | -- | 0.168 | 7.92 | 24.76 | 1394 | -- | -- |
| 117.82 | 0.507 | 2.85 | 0.254 | -- | -- | -- | -- | 0.0621 | -- | -- | -- | -- | -- |
| 118.83 | 0.51 | 2.86 | -- | 0.108 | -- | -- | -- | 0.0336 | 9.73 | -- | -- | -- | -- |
| 113.31 | 0.496 | 2.83 | -- | -- | 0.425 | -- | -- | 0.168 | -- | 24.8 | 1394 | -- | -- |
| 119.52 | 0.51 | 2.86 | -- | -- | -- | -- | -- | 0.0339 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 98.47 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 4 | 102.17 | radiation | 1.0 | 90 | < th | dose independent | rect. | 14 | 1 |
| 5 | 102.17 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 25 | 103.84 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 32 | 104.14 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 33 | 104.18 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 10 | 6 |
| 41 | 104.39 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 47 | 104.51 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 10 | 6 |
| 56 | 104.62 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 15 | 1 |
| 58 | 104.67 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 15 | 1 |
| 59 | 104.67 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 10 | 3 |
| 61 | 104.71 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 69 | 104.85 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 13 | 3 |
| 113 | 105.38 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 22 | NA |
| 124 | 105.49 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 23 | 2 |
| 135 | 105.54 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 142 | 105.59 | humidity | 80.0 | 720 | > th | dose independent | rect. | 24 | 8 |
| 143 | 105.60 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 150 | 105.64 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 23 | 2 |
| 165 | 105.78 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 15 | 4 |
| 176 | 105.87 | humidity | 80.0 | 720 | < th | dose independent | rect. | 22 | 11 |
| 179 | 105.88 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 187 | 105.92 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 22 | 8 |
| 211 | 106.07 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 22 | 5 |
| 213 | 106.09 | humidity | 80.0 | 720 | < th | dose independent | rect. | 22 | 9 |
| 237 | 106.19 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 2 | 15 |
| 251 | 106.27 | temperature | 25.0 | 1440 | < th | dose independent | sin | 23 | NA |
| 254 | 106.28 | temperature | 25.0 | 1440 | > th | dose independent | sin | 23 | NA |
| 259 | 106.29 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 4 | 13 |
| 282 | 106.34 | temperature | 25.0 | 90 | < th | dose independent | rect. | 13 | 4 |
| 294 | 106.36 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 10 | 15 |
| 306 | 106.38 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 10 | 15 |
| 361 | 106.53 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 24 | 17 |
| 402 | 106.62 | wind | 5.0 | 1440 | > th | dose independent | rect. | 21 | 17 |
| 466 | 106.75 | wind | 5.0 | 1440 | < th | dose independent | rect. | 21 | 17 |
| 593 | 106.98 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 22 | 19 |
| 794 | 107.37 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 812 | 107.38 | temperature | 25.0 | 270 | < th | dose dependent | sin | 0 | NA |
| 814 | 107.39 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 876 | 107.47 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 2 | 23 |
| 879 | 107.47 | humidity | 60.0 | 90 | < th | dose dependent | rect. | 9 | 1 |
| 933 | 107.52 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 4 | 21 |
| 948 | 107.54 | temperature | 25.0 | 1440 | < th | dose independent | no | NA | NA |
| 966 | 107.56 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 986 | 107.59 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 1 |