Os07g0546200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0546200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69.25 | 0.391 | 11.8 | 0.572 | 0.722 | -1.22 | -0.528 | -0.211 | -0.0439 | 7.63 | 25.7 | 14 | -- | -- |
| 69.33 | 0.388 | 11.8 | 0.543 | 0.72 | -1.2 | -0.514 | -- | -0.0449 | 7.65 | 25.71 | 13 | -- | -- |
| 70.02 | 0.39 | 11.8 | 0.557 | 0.724 | -1.21 | -- | -0.118 | -0.0392 | 7.67 | 25.7 | 13 | -- | -- |
| 70.04 | 0.39 | 11.8 | 0.527 | 0.722 | -1.2 | -- | -- | -0.0474 | 7.71 | 25.7 | 13 | -- | -- |
| 96.69 | 0.46 | 11.8 | 0.548 | -- | -1.3 | -- | -0.193 | -0.0292 | -- | 25 | 6 | -- | -- |
| 90.97 | 0.447 | 11.7 | 0.822 | 0.773 | -- | -0.311 | -- | 0.207 | 9.05 | -- | -- | -- | -- |
| 91.29 | 0.447 | 11.7 | 0.811 | 0.773 | -- | -- | -- | 0.207 | 9.11 | -- | -- | -- | -- |
| 96.76 | 0.46 | 11.8 | 0.519 | -- | -1.29 | -- | -- | -0.0353 | -- | 25 | 4 | -- | -- |
| 76.78 | 0.408 | 11.8 | -- | 0.722 | -1.37 | -- | -- | -0.113 | 7.64 | 25.7 | 46 | -- | -- |
| 125.75 | 0.524 | 11.8 | 0.809 | -- | -- | -- | -- | 0.211 | -- | -- | -- | -- | -- |
| 108.64 | 0.488 | 11.8 | -- | 0.773 | -- | -- | -- | 0.116 | 9.03 | -- | -- | -- | -- |
| 103.34 | 0.475 | 11.8 | -- | -- | -1.46 | -- | -- | -0.117 | -- | 24.9 | 2 | -- | -- |
| 143.03 | 0.558 | 11.8 | -- | -- | -- | -- | -- | 0.121 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 63.38 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 14 |
| 11 | 65.83 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 12 | 66.00 | wind | 9 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 14 | 66.18 | temperature | 20 | 90 | > th | dose independent | rect. | 5 | 22 |
| 15 | 66.51 | temperature | 20 | 90 | > th | dose independent | rect. | 19 | 7 |
| 20 | 66.83 | wind | 9 | 43200 | < th | dose independent | rect. | 10 | 4 |
| 21 | 66.86 | temperature | 20 | 270 | > th | dose independent | rect. | 18 | 16 |
| 22 | 66.99 | wind | 7 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 24 | 67.06 | wind | 7 | 43200 | > th | dose dependent | rect. | 10 | 4 |
| 25 | 67.11 | wind | 9 | 43200 | > th | dose independent | rect. | 10 | 4 |
| 28 | 67.21 | wind | 7 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 30 | 67.28 | wind | 7 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 34 | 67.50 | wind | 9 | 43200 | > th | dose independent | rect. | 9 | 6 |
| 35 | 67.59 | wind | 9 | 43200 | < th | dose independent | rect. | 9 | 6 |
| 40 | 67.66 | temperature | 15 | 10 | > th | dose dependent | sin | 8 | NA |
| 43 | 67.68 | temperature | 20 | 90 | > th | dose independent | rect. | 20 | 15 |
| 63 | 68.24 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 18 |
| 76 | 68.56 | temperature | 20 | 90 | > th | dose independent | rect. | 19 | 20 |
| 77 | 68.57 | radiation | 30 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 86 | 68.68 | temperature | 15 | 90 | > th | dose dependent | rect. | 19 | 7 |
| 88 | 68.69 | temperature | 30 | 10 | < th | dose dependent | sin | 8 | NA |
| 89 | 68.70 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 16 |
| 124 | 69.14 | temperature | 20 | 270 | > th | dose independent | rect. | 17 | 20 |
| 125 | 69.26 | temperature | 20 | 270 | > th | dose independent | rect. | 17 | 7 |
| 129 | 69.33 | wind | 9 | 43200 | < th | dose dependent | rect. | 22 | 6 |
| 130 | 69.34 | temperature | 25 | 10 | < th | dose dependent | rect. | 22 | 22 |
| 135 | 69.36 | temperature | 25 | 90 | < th | dose dependent | rect. | 22 | 23 |
| 138 | 69.40 | wind | 9 | 43200 | < th | dose dependent | rect. | 22 | 8 |
| 146 | 69.44 | radiation | 30 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 147 | 69.44 | wind | 9 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 158 | 69.48 | wind | 3 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 160 | 69.49 | temperature | 25 | 90 | < th | dose dependent | rect. | 11 | 20 |
| 177 | 69.55 | temperature | 25 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 181 | 69.57 | wind | 1 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 186 | 69.60 | wind | 9 | 43200 | < th | dose dependent | rect. | 23 | 4 |
| 196 | 69.71 | temperature | 25 | 10 | < th | dose dependent | rect. | 10 | 22 |
| 197 | 69.71 | temperature | 25 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 201 | 69.74 | wind | 1 | 43200 | > th | dose dependent | rect. | 22 | 5 |
| 220 | 69.81 | radiation | 20 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 231 | 69.83 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 233 | 69.83 | temperature | 25 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 246 | 69.86 | temperature | 25 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 249 | 69.86 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 256 | 69.89 | temperature | 25 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 259 | 69.91 | wind | 9 | 43200 | < th | dose independent | rect. | 4 | 12 |
| 264 | 69.93 | temperature | 25 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 273 | 69.98 | temperature | 25 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 275 | 69.99 | wind | 1 | 43200 | > th | dose dependent | rect. | 22 | 8 |
| 301 | 70.09 | wind | 9 | 43200 | > th | dose independent | rect. | 4 | 12 |
| 304 | 70.11 | temperature | 25 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 306 | 70.12 | wind | 9 | 43200 | < th | dose independent | sin | 23 | NA |
| 317 | 70.15 | wind | 9 | 43200 | > th | dose independent | sin | 23 | NA |
| 323 | 70.16 | temperature | 25 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 353 | 70.22 | radiation | 30 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 442 | 70.48 | wind | 9 | 43200 | < th | dose independent | rect. | 21 | 20 |
| 474 | 70.59 | wind | 9 | 43200 | > th | dose independent | rect. | 10 | 21 |
| 477 | 70.60 | wind | 9 | 43200 | > th | dose independent | rect. | 21 | 20 |
| 507 | 70.66 | temperature | 20 | 270 | > th | dose dependent | rect. | 19 | 4 |
| 510 | 70.67 | wind | 9 | 43200 | < th | dose independent | rect. | 10 | 21 |
| 543 | 70.74 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 8 |
| 570 | 70.80 | wind | 9 | 43200 | > th | dose independent | rect. | 9 | 16 |
| 651 | 70.91 | radiation | 40 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 658 | 70.93 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 664 | 70.94 | wind | 9 | 43200 | < th | dose independent | rect. | 9 | 15 |
| 817 | 71.11 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 20 |
| 821 | 71.12 | wind | 1 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 822 | 71.12 | wind | 9 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 915 | 71.20 | radiation | 20 | 43200 | > th | dose independent | sin | 7 | NA |