Os07g0543600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Strictosidine synthase family protein.
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Os07g0543600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Strictosidine synthase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 170.84 | 0.614 | 2.61 | 1.87 | 0.0657 | -11.3 | 0.186 | 66.7 | -0.00755 | 14.5 | 999.4 | 78 | -- | -- |
| 176.27 | 0.623 | 2.92 | 0.121 | 0.0772 | -0.052 | 0.232 | -- | -0.0146 | 14.3 | 999.4 | 78 | -- | -- |
| 170.12 | 0.607 | 2.65 | 1.67 | 0.0787 | -11.7 | -- | 69.3 | -0.0107 | 15.9 | 998.8 | 84 | -- | -- |
| 176.39 | 0.623 | 2.92 | 0.131 | 0.0789 | -0.123 | -- | -- | -0.0146 | 14.6 | 998.8 | 84 | -- | -- |
| 169.2 | 0.606 | 2.55 | 2.32 | -- | -19.2 | -- | 114 | -0.00825 | -- | 998.3 | 78 | -- | -- |
| 176.29 | 0.622 | 2.92 | 0.117 | 0.0769 | -- | 0.232 | -- | -0.0132 | 14.3 | -- | -- | -- | -- |
| 176.49 | 0.622 | 2.91 | 0.124 | 0.0781 | -- | -- | -- | -0.0117 | 14.5 | -- | -- | -- | -- |
| 176.31 | 0.621 | 2.92 | 0.133 | -- | -0.352 | -- | -- | -0.0189 | -- | 997.3 | 208 | -- | -- |
| 176.42 | 0.622 | 2.92 | -- | 0.0783 | -0.331 | -- | -- | -0.0316 | 14.7 | 997.3 | 160 | -- | -- |
| 176.85 | 0.621 | 2.92 | 0.12 | -- | -- | -- | -- | -0.0137 | -- | -- | -- | -- | -- |
| 176.89 | 0.622 | 2.92 | -- | 0.0757 | -- | -- | -- | -0.0255 | 14.5 | -- | -- | -- | -- |
| 176.76 | 0.619 | 2.92 | -- | -- | -0.276 | -- | -- | -0.0333 | -- | 997.2 | 653 | -- | -- |
| 177.23 | 0.621 | 2.92 | -- | -- | -- | -- | -- | -0.027 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 155.06 | atmosphere | 1000.0 | 30 | < th | dose dependent | rect. | 15 | 7 |
| 5 | 155.10 | atmosphere | 1000.0 | 30 | < th | dose dependent | rect. | 15 | 5 |
| 9 | 155.15 | atmosphere | 1000.0 | 30 | < th | dose dependent | rect. | 15 | 3 |
| 19 | 155.26 | atmosphere | 1000.0 | 30 | < th | dose dependent | rect. | 15 | 1 |
| 30 | 155.50 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 131 | 164.64 | wind | 1.0 | 90 | < th | dose independent | rect. | 14 | 1 |
| 149 | 165.74 | wind | 3.0 | 90 | < th | dose independent | rect. | 15 | 3 |
| 217 | 166.93 | atmosphere | 1000.0 | 90 | < th | dose dependent | sin | 18 | NA |
| 231 | 167.06 | wind | 3.0 | 10 | < th | dose dependent | rect. | 16 | 1 |
| 247 | 167.18 | wind | 1.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 275 | 167.57 | radiation | 20.0 | 90 | < th | dose independent | rect. | 15 | 2 |
| 288 | 167.76 | wind | 3.0 | 10 | < th | dose independent | rect. | 15 | 3 |
| 326 | 168.18 | temperature | 30.0 | 90 | < th | dose independent | rect. | 15 | 2 |
| 339 | 168.34 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 414 | 168.96 | temperature | 30.0 | 10 | > th | dose independent | rect. | 13 | 22 |
| 492 | 169.55 | humidity | 60.0 | 90 | > th | dose independent | rect. | 15 | 2 |
| 500 | 169.59 | temperature | 30.0 | 10 | > th | dose independent | rect. | 14 | 1 |
| 520 | 169.69 | wind | 1.0 | 90 | < th | dose independent | rect. | 1 | 3 |
| 524 | 169.70 | wind | 1.0 | 30 | < th | dose dependent | rect. | 11 | 3 |
| 558 | 169.84 | temperature | 30.0 | 10 | > th | dose independent | rect. | 10 | 1 |
| 650 | 169.91 | wind | 3.0 | 1440 | < th | dose independent | rect. | 15 | 1 |
| 651 | 169.91 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 3 | 1 |
| 660 | 169.91 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 3 | 1 |
| 677 | 169.93 | radiation | 20.0 | 30 | < th | dose independent | rect. | 15 | 17 |
| 717 | 170.04 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 7 |
| 787 | 170.26 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 15 | 2 |
| 789 | 170.27 | wind | 3.0 | 1440 | > th | dose independent | rect. | 15 | 1 |
| 851 | 170.45 | humidity | 60.0 | 10 | > th | dose independent | rect. | 15 | 3 |
| 853 | 170.45 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 10 |
| 856 | 170.46 | atmosphere | 1005.0 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 859 | 170.47 | temperature | 30.0 | 90 | < th | dose independent | rect. | 14 | 18 |
| 861 | 170.48 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 863 | 170.49 | atmosphere | 1005.0 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 866 | 170.51 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 870 | 170.52 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 20 |
| 894 | 170.57 | temperature | 20.0 | 270 | > th | dose independent | rect. | 2 | 22 |
| 895 | 170.57 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 15 | 3 |
| 905 | 170.60 | atmosphere | 1005.0 | 4320 | > th | dose independent | rect. | 12 | 1 |
| 907 | 170.60 | atmosphere | 1005.0 | 4320 | < th | dose independent | rect. | 12 | 1 |
| 914 | 170.61 | atmosphere | 1000.0 | 30 | < th | dose independent | sin | 18 | NA |
| 915 | 170.61 | atmosphere | 1005.0 | 4320 | < th | dose independent | rect. | 21 | 4 |
| 920 | 170.62 | atmosphere | 1005.0 | 4320 | < th | dose independent | rect. | 20 | 6 |
| 942 | 170.66 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 7 | 3 |
| 946 | 170.66 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 7 | 3 |
| 980 | 170.74 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 981 | 170.74 | atmosphere | 1005.0 | 4320 | > th | dose independent | rect. | 20 | 6 |
| 989 | 170.75 | temperature | 30.0 | 10 | > th | dose independent | rect. | 13 | 6 |