Os07g0541900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to KI domain interacting kinase 1.
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Os07g0541900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to KI domain interacting kinase 1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 448.39 | 0.995 | 3.64 | 0.259 | 0.789 | 4.63 | -1.31 | 0.894 | 0.159 | 3.66 | 90.29 | 706 | 19.9 | 0.883 |
| 447.38 | 0.985 | 3.65 | 0.32 | 0.833 | 4.83 | -0.964 | -- | 0.148 | 3.53 | 90.47 | 706 | 19.9 | 0.817 |
| 451.59 | 0.99 | 3.64 | 0.291 | 0.85 | 4.78 | -- | 0.359 | 0.195 | 3.5 | 90.4 | 706 | 19.9 | 0.8 |
| 450.76 | 0.989 | 3.64 | 0.31 | 0.811 | 4.85 | -- | -- | 0.159 | 3.52 | 90.53 | 705 | 19.9 | 0.817 |
| 484.3 | 1.02 | 3.64 | 0.337 | -- | 5.17 | -- | -0.18 | 0.214 | -- | 90.3 | 704 | 19.9 | 0.85 |
| 689.79 | 1.23 | 3.71 | 0.426 | 1.33 | -- | -0.432 | -- | -0.106 | 3.01 | -- | -- | -- | -- |
| 690.4 | 1.23 | 3.7 | 0.436 | 1.33 | -- | -- | -- | -0.103 | 2.97 | -- | -- | -- | -- |
| 484.33 | 1.02 | 3.64 | 0.332 | -- | 5.14 | -- | -- | 0.215 | -- | 90.28 | 704 | 19.9 | 0.854 |
| 453.31 | 0.992 | 3.65 | -- | 0.814 | 4.88 | -- | -- | 0.127 | 3.52 | 90.53 | 705 | 19.9 | 0.816 |
| 791.81 | 1.31 | 3.7 | 0.493 | -- | -- | -- | -- | -0.0688 | -- | -- | -- | -- | -- |
| 695.41 | 1.23 | 3.72 | -- | 1.34 | -- | -- | -- | -0.152 | 2.97 | -- | -- | -- | -- |
| 487.23 | 1.03 | 3.64 | -- | -- | 5.16 | -- | -- | 0.179 | -- | 90.29 | 704 | 19.9 | 0.85 |
| 798.22 | 1.32 | 3.71 | -- | -- | -- | -- | -- | -0.123 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 470.42 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 3 | 477.34 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 18 | 5 |
| 10 | 488.88 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 9 | 14 |
| 14 | 490.23 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 11 | 12 |
| 32 | 498.27 | humidity | 90.0 | 720 | > th | dose dependent | sin | 20 | NA |
| 50 | 506.87 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 16 | 10 |
| 68 | 511.79 | humidity | 90.0 | 720 | > th | dose independent | rect. | 16 | 7 |
| 77 | 513.51 | humidity | 90.0 | 720 | > th | dose independent | rect. | 19 | 2 |
| 106 | 517.40 | humidity | 90.0 | 720 | > th | dose independent | rect. | 9 | 14 |
| 115 | 517.79 | humidity | 90.0 | 720 | > th | dose independent | rect. | 11 | 12 |
| 138 | 519.62 | humidity | 90.0 | 720 | < th | dose independent | rect. | 18 | 6 |
| 154 | 520.74 | humidity | 60.0 | 720 | > th | dose dependent | sin | 16 | NA |
| 171 | 521.97 | humidity | 90.0 | 720 | > th | dose independent | sin | 19 | NA |
| 252 | 529.52 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 15 |
| 256 | 529.67 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 14 |
| 273 | 530.14 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 19 | 9 |
| 288 | 530.84 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 18 | 6 |
| 290 | 530.92 | humidity | 80.0 | 1440 | < th | dose independent | sin | 0 | NA |
| 297 | 531.16 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 9 | 15 |
| 310 | 531.57 | humidity | 80.0 | 1440 | > th | dose independent | sin | 23 | NA |
| 352 | 532.62 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 3 |
| 354 | 532.62 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 3 |
| 356 | 532.65 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 3 |
| 423 | 534.02 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 10 | 6 |
| 692 | 537.88 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 3 | 21 |
| 717 | 538.10 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 10 | 10 |
| 738 | 538.19 | humidity | 50.0 | 1440 | > th | dose dependent | no | NA | NA |
| 748 | 538.35 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 18 | 22 |
| 752 | 538.38 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 18 | 22 |
| 761 | 538.42 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 11 | 22 |
| 766 | 538.46 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 774 | 538.55 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 24 | 4 |
| 818 | 538.81 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 845 | 539.03 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 9 | 15 |
| 870 | 539.09 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 16 | 23 |
| 891 | 539.29 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 892 | 539.30 | radiation | 1.0 | 1440 | < th | dose independent | sin | 0 | NA |
| 900 | 539.39 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 8 |
| 903 | 539.39 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 21 |
| 915 | 539.45 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 18 |
| 925 | 539.49 | humidity | 90.0 | 1440 | < th | dose dependent | no | NA | NA |
| 944 | 539.57 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 986 | 539.82 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 19 | 2 |