Os07g0541600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os07g0541600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 105.16 | 0.482 | 7.91 | -2.83 | 0.428 | 0.41 | -0.495 | -6.81 | -0.218 | 10.6 | 26.3 | 3856 | -- | -- |
| 115.81 | 0.505 | 7.73 | -1.44 | 0.481 | -0.273 | -0.312 | -- | 0.0539 | 11.4 | 26.3 | 3856 | -- | -- |
| 106.03 | 0.48 | 7.9 | -2.8 | 0.439 | 0.396 | -- | -6.61 | -0.208 | 10.5 | 26.4 | 3388 | -- | -- |
| 113.45 | 0.496 | 7.74 | -1.38 | 0.423 | -0.367 | -- | -- | -0.00685 | 10.4 | 29.6 | 3834 | -- | -- |
| 117.26 | 0.504 | 7.9 | -2.7 | -- | 0.27 | -- | -6.27 | -0.194 | -- | 26.4 | 3839 | -- | -- |
| 116.95 | 0.507 | 7.73 | -1.48 | 0.431 | -- | -0.325 | -- | 0.0456 | 10.9 | -- | -- | -- | -- |
| 117.38 | 0.507 | 7.73 | -1.49 | 0.433 | -- | -- | -- | 0.0442 | 10.7 | -- | -- | -- | -- |
| 123.36 | 0.517 | 7.72 | -1.43 | -- | -0.457 | -- | -- | 0.185 | -- | 24.1 | 18244 | -- | -- |
| 122.63 | 0.516 | 7.61 | -- | 0.414 | -1.18 | -- | -- | 0.562 | 10.6 | 7.667 | 47520 | -- | -- |
| 128.99 | 0.531 | 7.74 | -1.5 | -- | -- | -- | -- | 0.0417 | -- | -- | -- | -- | -- |
| 176.21 | 0.621 | 7.69 | -- | 0.445 | -- | -- | -- | 0.211 | 11 | -- | -- | -- | -- |
| 129.42 | 0.53 | 7.61 | -- | -- | -1.13 | -- | -- | 0.628 | -- | 20.57 | 47520 | -- | -- |
| 188.55 | 0.641 | 7.7 | -- | -- | -- | -- | -- | 0.208 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 103.56 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 2 | 103.56 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 4 | 103.83 | wind | 3.0 | 14400 | > th | dose independent | rect. | 12 | 3 |
| 7 | 104.03 | wind | 3.0 | 14400 | < th | dose independent | rect. | 13 | 2 |
| 9 | 104.03 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 6 |
| 10 | 104.11 | wind | 1.0 | 43200 | < th | dose independent | rect. | 2 | 3 |
| 14 | 104.30 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 16 | 104.32 | wind | 1.0 | 43200 | < th | dose independent | rect. | 2 | 5 |
| 17 | 104.35 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 5 |
| 28 | 104.49 | wind | 1.0 | 43200 | > th | dose independent | rect. | 2 | 3 |
| 38 | 104.61 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 39 | 104.61 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 14 | 1 |
| 50 | 104.78 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 71 | 104.88 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 18 | 2 |
| 77 | 104.93 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 79 | 104.93 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 18 | 2 |
| 106 | 105.25 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 2 |
| 126 | 105.37 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 6 | 11 |
| 130 | 105.41 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 6 | 11 |
| 138 | 105.53 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 139 | 105.53 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 142 | 105.57 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 152 | 105.61 | wind | 3.0 | 14400 | > th | dose independent | rect. | 12 | 9 |
| 154 | 105.63 | wind | 3.0 | 14400 | > th | dose independent | rect. | 10 | 10 |
| 164 | 105.71 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 172 | 105.78 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 180 | 105.81 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 181 | 105.81 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 1 |
| 182 | 105.81 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 4 |
| 186 | 105.82 | wind | 3.0 | 14400 | < th | dose independent | rect. | 12 | 9 |
| 187 | 105.84 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 188 | 105.85 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 190 | 105.85 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 202 | 105.87 | wind | 3.0 | 14400 | < th | dose independent | rect. | 10 | 10 |
| 219 | 105.92 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 225 | 105.95 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 10 | 4 |
| 229 | 105.97 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 14 | 3 |
| 232 | 105.97 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 14 | 3 |
| 240 | 105.99 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 11 | 6 |
| 247 | 106.02 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 253 | 106.04 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 255 | 106.05 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 257 | 106.05 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 21 | 11 |
| 260 | 106.05 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 266 | 106.06 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 1 | 7 |
| 283 | 106.08 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 7 |
| 288 | 106.11 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 19 | 2 |
| 291 | 106.12 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 11 | 6 |
| 294 | 106.12 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 11 | 6 |
| 304 | 106.16 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 11 | 6 |
| 314 | 106.16 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 316 | 106.17 | humidity | 90.0 | 4320 | < th | dose independent | rect. | 12 | 2 |
| 317 | 106.17 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 8 | 3 |
| 318 | 106.17 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 5 | 7 |
| 319 | 106.17 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 5 | 11 |
| 321 | 106.18 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 331 | 106.20 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 11 |
| 332 | 106.20 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 11 |
| 341 | 106.23 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 363 | 106.25 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 10 | 3 |
| 365 | 106.26 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 367 | 106.26 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 378 | 106.28 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 7 | 9 |
| 379 | 106.28 | humidity | 50.0 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 380 | 106.29 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 382 | 106.29 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 8 |
| 385 | 106.29 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 8 |
| 391 | 106.30 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 13 | 17 |
| 394 | 106.31 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 7 | 7 |
| 399 | 106.32 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 18 | 4 |
| 401 | 106.33 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 7 | 9 |
| 404 | 106.33 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 10 | 2 |
| 406 | 106.33 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 7 | 9 |
| 415 | 106.35 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 11 | 9 |
| 418 | 106.35 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 11 | 9 |
| 421 | 106.36 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 11 | 9 |
| 427 | 106.37 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 5 |
| 436 | 106.38 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 13 | 16 |
| 473 | 106.43 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 13 | 7 |
| 476 | 106.43 | humidity | 60.0 | 43200 | > th | dose dependent | rect. | 9 | 3 |
| 478 | 106.43 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 13 | 7 |
| 479 | 106.43 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 9 | 8 |
| 488 | 106.45 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 13 | 7 |
| 542 | 106.49 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 10 |
| 546 | 106.50 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 7 | 4 |
| 552 | 106.50 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 7 | 4 |
| 566 | 106.52 | temperature | 15.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 582 | 106.53 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 15 | 14 |
| 598 | 106.55 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 5 | 9 |
| 601 | 106.56 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 9 | 5 |
| 607 | 106.56 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 9 | 5 |
| 614 | 106.57 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 8 | 6 |
| 626 | 106.58 | temperature | 15.0 | 14400 | > th | dose dependent | rect. | 6 | 3 |
| 640 | 106.59 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 649 | 106.60 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 662 | 106.61 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 9 | 2 |
| 697 | 106.63 | wind | 1.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 757 | 106.68 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 9 | 6 |
| 762 | 106.69 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 7 | 3 |
| 768 | 106.69 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 7 | 3 |
| 785 | 106.70 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 18 | 8 |
| 823 | 106.75 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 824 | 106.75 | wind | 5.0 | 43200 | > th | dose independent | rect. | 3 | 6 |
| 830 | 106.76 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 844 | 106.77 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 9 | 5 |
| 872 | 106.79 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 6 | 13 |
| 902 | 106.80 | humidity | 50.0 | 43200 | > th | dose dependent | rect. | 8 | 7 |
| 919 | 106.81 | temperature | 25.0 | 4320 | > th | dose dependent | sin | 4 | NA |
| 956 | 106.83 | wind | 5.0 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 991 | 106.85 | temperature | 15.0 | 14400 | > th | dose dependent | rect. | 1 | 13 |
| 995 | 106.86 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 11 | 1 |