FiT-DB / Search/ Help/ Sample detail

Os07g0541500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to KI domain interacting kinase 1.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.98 (0.0245) R2 : 0.671
β1 : 2.6 (0.0896) R2dD : 0.63 R2D : 0.461
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.769 (0.0522) R2dN8 : 0.21 R2N8 : 0.0406
σ : 0.459
deviance : 96.57
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
62.3 0.371 9.93 3.2 0.532 -0.939 1.89 -3.64 0.815 21.1 0.8192 4375 -- --
67.52 0.383 10 2.67 0.498 -0.478 1.71 -- 0.624 20.8 6.803 8663 -- --
66 0.378 9.92 3.26 0.179 -0.768 -- -3.82 0.895 20.9 1.624 5380 -- --
77.75 0.411 10 2.63 0.477 -0.489 -- -- 0.609 21.1 7.138 8696 -- --
63.85 0.372 9.94 3.09 -- -1.26 -- -4.4 0.773 -- 1.171 5377 -- --
72.92 0.4 9.99 2.66 0.488 -- 1.75 -- 0.773 20.9 -- -- -- --
83.17 0.427 9.99 2.6 0.481 -- -- -- 0.772 21.2 -- -- -- --
84.29 0.429 9.98 2.6 -- 0.389 -- -- 0.765 -- 21.31 8226 -- --
116.47 0.503 10.2 -- 0.398 -1.88 -- -- -0.0155 20.9 0.01 47520 -- --
96.57 0.459 9.98 2.6 -- -- -- -- 0.769 -- -- -- -- --
261.05 0.756 10.1 -- 0.482 -- -- -- 0.482 21.6 -- -- -- --
128.28 0.527 10.2 -- -- -1.88 -- -- -0.014 -- 0.01 47520 -- --
274.82 0.774 10 -- -- -- -- -- 0.481 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 57.52 temperature 30.0 270 < th dose independent rect. 7 19
2 57.64 radiation 1.0 270 < th dose dependent rect. 5 22
3 58.01 atmosphere 1010.0 270 < th dose independent rect. 2 5
7 58.20 radiation 1.0 270 < th dose independent rect. 8 19
8 58.22 radiation 1.0 270 < th dose dependent rect. 8 19
9 58.23 precipitation 0.1 270 < th dose independent rect. 2 5
10 58.23 precipitation 0.1 270 < th dose dependent rect. 2 5
11 58.25 wind 5.0 270 < th dose independent rect. 2 5
12 58.25 temperature 30.0 270 < th dose independent rect. 17 10
15 58.29 humidity 60.0 270 > th dose independent rect. 17 10
16 58.31 wind 9.0 270 < th dose dependent rect. 2 5
19 58.33 temperature 10.0 270 > th dose independent rect. 2 5
21 58.33 temperature 30.0 270 < th dose independent rect. 2 5
22 58.33 humidity 50.0 270 > th dose independent rect. 2 5
24 58.33 atmosphere 995.0 270 > th dose independent rect. 2 5
26 58.33 radiation 30.0 270 < th dose independent rect. 2 5
28 58.33 temperature 10.0 270 > th dose independent rect. 7 19
31 58.37 atmosphere 1010.0 270 < th dose independent rect. 1 7
38 58.48 radiation 40.0 270 < th dose dependent rect. 2 5
40 58.52 wind 5.0 270 < th dose independent rect. 3 3
44 58.56 humidity 50.0 270 > th dose independent rect. 7 19
47 58.60 radiation 1.0 270 < th dose independent rect. 16 11
48 58.60 radiation 10.0 270 < th dose dependent rect. 16 11
49 58.61 wind 9.0 270 < th dose dependent rect. 3 3
50 58.61 humidity 50.0 270 > th dose dependent rect. 2 5
66 58.66 wind 9.0 270 < th dose independent rect. 7 19
69 58.70 precipitation 0.1 270 < th dose independent rect. 3 3
71 58.70 precipitation 0.1 270 < th dose dependent rect. 3 3
81 58.75 humidity 50.0 270 > th dose independent rect. 6 21
93 58.81 temperature 10.0 270 > th dose independent rect. 3 3
95 58.81 temperature 30.0 270 < th dose independent rect. 3 3
96 58.81 humidity 50.0 270 > th dose independent rect. 3 3
99 58.81 atmosphere 995.0 270 > th dose independent rect. 3 3
100 58.81 atmosphere 1015.0 270 < th dose independent rect. 3 3
101 58.81 radiation 20.0 270 < th dose independent rect. 3 3
106 58.81 temperature 10.0 270 > th dose independent rect. 6 21
110 58.83 precipitation 0.1 270 < th dose independent rect. 7 19
111 58.83 precipitation 0.1 270 < th dose dependent rect. 7 19
134 58.95 humidity 50.0 270 > th dose dependent rect. 3 3
135 58.97 radiation 40.0 270 < th dose dependent rect. 3 3
158 59.12 radiation 40.0 270 < th dose dependent rect. 1 7
166 59.15 temperature 10.0 270 > th dose dependent rect. 13 18
175 59.26 wind 9.0 270 < th dose independent rect. 6 21
180 59.31 radiation 1.0 90 < th dose dependent sin 12 NA
187 59.34 temperature 10.0 90 > th dose dependent rect. 15 17
204 59.44 precipitation 0.1 270 < th dose independent rect. 6 21
205 59.44 precipitation 0.1 270 < th dose dependent rect. 6 21
210 59.51 humidity 70.0 30 > th dose dependent rect. 5 12
228 59.59 precipitation 0.1 270 < th dose independent rect. 7 7
230 59.59 precipitation 0.1 270 < th dose dependent rect. 7 7
252 59.64 wind 9.0 270 < th dose independent rect. 14 17
274 59.73 temperature 10.0 270 > th dose independent rect. 7 7
275 59.73 atmosphere 995.0 270 > th dose independent rect. 7 7
276 59.73 atmosphere 1015.0 270 < th dose independent rect. 7 7
277 59.73 temperature 10.0 270 > th dose independent rect. 14 17
280 59.74 temperature 10.0 10 > th dose dependent rect. 14 18
284 59.76 radiation 1.0 270 < th dose dependent rect. 3 11
315 59.89 wind 9.0 270 < th dose independent rect. 7 7
321 59.92 radiation 1.0 270 > th dose independent rect. 7 7
326 59.93 precipitation 0.1 270 < th dose independent rect. 14 17
329 59.93 precipitation 0.1 270 < th dose dependent rect. 14 17
340 59.95 temperature 10.0 270 > th dose dependent rect. 2 5
354 59.98 radiation 1.0 270 > th dose independent rect. 13 17
356 60.00 wind 9.0 270 < th dose dependent rect. 7 18
362 60.03 temperature 10.0 270 > th dose dependent rect. 12 9
364 60.04 wind 7.0 270 < th dose independent rect. 2 16
375 60.08 radiation 1.0 90 > th dose independent sin 12 NA
377 60.09 wind 1.0 270 > th dose independent rect. 12 9
383 60.11 radiation 1.0 270 < th dose independent rect. 3 11
390 60.14 temperature 15.0 270 > th dose independent rect. 18 9
399 60.16 atmosphere 995.0 270 > th dose independent rect. 7 19
400 60.16 humidity 70.0 90 > th dose dependent sin 3 NA
409 60.21 humidity 90.0 90 < th dose independent rect. 9 6
416 60.24 temperature 10.0 270 > th dose dependent rect. 3 3
425 60.31 radiation 1.0 270 > th dose independent sin 15 NA
426 60.31 temperature 15.0 270 > th dose independent rect. 3 15
431 60.32 radiation 1.0 270 < th dose independent sin 14 NA
432 60.32 precipitation 0.1 90 < th dose independent rect. 9 6
433 60.32 precipitation 0.1 90 < th dose dependent rect. 9 6
452 60.34 radiation 1.0 270 < th dose dependent sin 15 NA
461 60.37 atmosphere 1015.0 270 < th dose dependent rect. 3 3
462 60.37 atmosphere 1015.0 270 < th dose dependent rect. 2 5
471 60.40 humidity 70.0 30 > th dose dependent rect. 5 9
483 60.42 radiation 1.0 90 < th dose independent sin 12 NA
489 60.43 wind 7.0 270 < th dose independent rect. 18 9
490 60.44 radiation 40.0 90 < th dose independent rect. 15 18
494 60.46 radiation 1.0 90 > th dose independent rect. 9 6
495 60.46 radiation 20.0 30 < th dose independent rect. 5 16
496 60.46 atmosphere 995.0 270 > th dose independent rect. 13 18
511 60.50 temperature 10.0 90 > th dose independent rect. 9 6
512 60.50 atmosphere 1015.0 90 < th dose independent rect. 9 6
528 60.53 radiation 1.0 270 > th dose independent rect. 11 20
548 60.60 wind 5.0 30 < th dose independent rect. 5 3
550 60.62 temperature 20.0 90 > th dose independent rect. 9 6
552 60.62 radiation 1.0 270 > th dose independent rect. 18 12
577 60.66 temperature 15.0 1440 > th dose independent rect. 5 5
578 60.66 wind 1.0 270 > th dose independent rect. 7 6
579 60.66 wind 9.0 90 < th dose independent rect. 9 6
581 60.66 humidity 90.0 270 < th dose independent rect. 20 17
590 60.68 atmosphere 995.0 90 > th dose independent rect. 9 6
643 60.76 atmosphere 1015.0 270 < th dose independent rect. 3 15
652 60.77 humidity 70.0 30 > th dose dependent rect. 5 7
656 60.78 temperature 30.0 270 < th dose dependent rect. 3 3
674 60.82 temperature 20.0 270 > th dose independent rect. 8 3
692 60.86 wind 9.0 270 < th dose independent rect. 12 9
698 60.87 wind 9.0 30 < th dose dependent rect. 5 3
725 60.92 precipitation 0.1 270 < th dose independent rect. 3 15
728 60.92 precipitation 0.1 270 < th dose dependent rect. 3 15
730 60.93 radiation 1.0 30 > th dose independent rect. 16 16
754 60.98 precipitation 0.1 30 < th dose independent rect. 5 3
759 60.98 precipitation 0.1 30 < th dose dependent rect. 5 3
760 60.98 temperature 30.0 270 < th dose dependent rect. 2 5
766 61.00 temperature 10.0 30 > th dose independent rect. 5 3
768 61.00 temperature 30.0 30 < th dose independent rect. 5 3
769 61.00 humidity 50.0 30 > th dose independent rect. 5 3
771 61.00 atmosphere 995.0 30 > th dose independent rect. 5 3
772 61.00 atmosphere 1015.0 30 < th dose independent rect. 5 3
775 61.00 temperature 10.0 30 > th dose independent rect. 8 21
782 61.02 temperature 15.0 270 > th dose independent rect. 12 9
785 61.03 radiation 40.0 30 < th dose independent rect. 5 3
795 61.04 atmosphere 995.0 270 > th dose independent rect. 18 9
836 61.08 wind 9.0 270 < th dose independent rect. 11 21
861 61.10 humidity 80.0 10 < th dose independent rect. 8 6
866 61.10 atmosphere 995.0 270 > th dose independent rect. 19 7
877 61.10 wind 9.0 30 < th dose independent rect. 8 21
887 61.11 temperature 10.0 270 > th dose independent rect. 21 15
888 61.11 atmosphere 995.0 270 > th dose independent rect. 21 15
891 61.11 temperature 15.0 270 > th dose independent rect. 11 21
911 61.14 wind 9.0 270 < th dose independent rect. 21 15
939 61.17 atmosphere 995.0 270 > th dose independent rect. 6 21
960 61.20 atmosphere 1015.0 270 < th dose independent rect. 7 18
992 61.24 radiation 1.0 270 > th dose dependent rect. 17 13