Os07g0541400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Receptor protein kinase.
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Os07g0541400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Receptor protein kinase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 72.65 | 0.4 | 10.4 | 1.66 | 1.54 | 0.327 | 0.224 | -1.84 | 0.624 | 18.2 | 2.9 | 721 | -- | -- |
| 78.53 | 0.413 | 10.4 | 1.57 | 1.45 | 0.336 | 0.53 | -- | 0.617 | 18.2 | 3.676 | 853 | -- | -- |
| 72.76 | 0.397 | 10.4 | 1.66 | 1.54 | 0.336 | -- | -1.91 | 0.622 | 18.2 | 2.866 | 721 | -- | -- |
| 79.47 | 0.415 | 10.4 | 1.6 | 1.45 | 0.278 | -- | -- | 0.616 | 18 | 3.6 | 847 | -- | -- |
| 152.37 | 0.578 | 10.3 | 1.85 | -- | -0.601 | -- | 0.123 | 0.576 | -- | 2.866 | 721 | -- | -- |
| 79.64 | 0.418 | 10.4 | 1.68 | 1.42 | -- | 0.655 | -- | 0.609 | 17.9 | -- | -- | -- | -- |
| 80.61 | 0.42 | 10.4 | 1.67 | 1.42 | -- | -- | -- | 0.612 | 17.8 | -- | -- | -- | -- |
| 129 | 0.529 | 10.3 | 1.95 | -- | -0.978 | -- | -- | 0.576 | -- | 2.3 | 189 | -- | -- |
| 105.22 | 0.478 | 10.4 | -- | 1.55 | 1.42 | -- | -- | 0.232 | 17.8 | 5.6 | 37029 | -- | -- |
| 185.64 | 0.637 | 10.3 | 1.63 | -- | -- | -- | -- | 0.578 | -- | -- | -- | -- | -- |
| 154.22 | 0.581 | 10.4 | -- | 1.4 | -- | -- | -- | 0.425 | 17.8 | -- | -- | -- | -- |
| 207.34 | 0.671 | 10.4 | -- | -- | 1.47 | -- | -- | 0.156 | -- | 5.601 | 38547 | -- | -- |
| 255.48 | 0.746 | 10.4 | -- | -- | -- | -- | -- | 0.398 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 67.58 | temperature | 25.0 | 270 | < th | dose independent | rect. | 22 | 7 |
| 2 | 67.81 | temperature | 25.0 | 270 | < th | dose independent | rect. | 23 | 5 |
| 5 | 68.16 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 23 | 4 |
| 10 | 68.50 | temperature | 25.0 | 270 | < th | dose independent | rect. | 5 | 11 |
| 14 | 68.82 | temperature | 25.0 | 30 | < th | dose independent | rect. | 6 | 10 |
| 21 | 68.90 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 7 | 20 |
| 25 | 68.96 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 5 | 10 |
| 26 | 68.96 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 7 | 20 |
| 48 | 69.21 | wind | 1.0 | 270 | > th | dose independent | rect. | 4 | 11 |
| 50 | 69.33 | humidity | 50.0 | 90 | > th | dose independent | rect. | 6 | 11 |
| 52 | 69.36 | humidity | 70.0 | 720 | > th | dose independent | rect. | 19 | 8 |
| 58 | 69.42 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 7 | 10 |
| 88 | 69.77 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 7 | 11 |
| 92 | 69.80 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 11 | 16 |
| 100 | 69.88 | radiation | 10.0 | 90 | < th | dose independent | rect. | 7 | 20 |
| 101 | 69.88 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 7 | 10 |
| 102 | 69.90 | humidity | 70.0 | 720 | > th | dose independent | rect. | 17 | 9 |
| 113 | 69.99 | humidity | 70.0 | 270 | > th | dose independent | rect. | 5 | 11 |
| 124 | 70.02 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 11 | 16 |
| 142 | 70.14 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 2 |
| 157 | 70.22 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 17 | 13 |
| 163 | 70.23 | radiation | 10.0 | 10 | < th | dose independent | rect. | 7 | 20 |
| 168 | 70.24 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 4 | 11 |
| 176 | 70.29 | wind | 9.0 | 270 | < th | dose independent | rect. | 4 | 11 |
| 194 | 70.36 | humidity | 70.0 | 90 | > th | dose independent | rect. | 7 | 10 |
| 198 | 70.37 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 18 | 13 |
| 208 | 70.42 | temperature | 25.0 | 270 | < th | dose independent | sin | 0 | NA |
| 210 | 70.42 | humidity | 80.0 | 10 | > th | dose independent | rect. | 7 | 20 |
| 212 | 70.43 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 11 |
| 230 | 70.50 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 11 |
| 238 | 70.51 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 5 | 10 |
| 240 | 70.52 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 11 |
| 241 | 70.52 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 4 | 11 |
| 242 | 70.52 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 13 |
| 243 | 70.52 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 13 |
| 244 | 70.52 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 13 |
| 284 | 70.64 | radiation | 10.0 | 90 | < th | dose independent | rect. | 9 | 18 |
| 286 | 70.64 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 13 | 14 |
| 303 | 70.67 | radiation | 30.0 | 270 | < th | dose independent | rect. | 11 | 14 |
| 308 | 70.68 | wind | 7.0 | 90 | < th | dose independent | rect. | 17 | 13 |
| 312 | 70.69 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 13 |
| 324 | 70.71 | humidity | 60.0 | 720 | > th | dose independent | rect. | 15 | 10 |
| 327 | 70.71 | humidity | 50.0 | 720 | > th | dose independent | rect. | 20 | 21 |
| 339 | 70.73 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 11 |
| 341 | 70.73 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 11 |
| 347 | 70.74 | radiation | 40.0 | 270 | < th | dose independent | rect. | 15 | 13 |
| 352 | 70.75 | humidity | 60.0 | 90 | > th | dose independent | rect. | 13 | 14 |
| 353 | 70.75 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 4 | 6 |
| 358 | 70.76 | temperature | 20.0 | 270 | < th | dose independent | rect. | 23 | 2 |
| 364 | 70.78 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 6 | 11 |
| 381 | 70.81 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 24 | 5 |
| 383 | 70.82 | humidity | 50.0 | 720 | > th | dose independent | rect. | 4 | 13 |
| 397 | 70.84 | temperature | 10.0 | 90 | > th | dose independent | rect. | 17 | 13 |
| 398 | 70.84 | radiation | 20.0 | 90 | < th | dose independent | rect. | 17 | 13 |
| 401 | 70.84 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 17 | 13 |
| 403 | 70.84 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 17 | 13 |
| 406 | 70.85 | radiation | 40.0 | 270 | < th | dose independent | rect. | 5 | 10 |
| 414 | 70.88 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 17 | 13 |
| 419 | 70.89 | wind | 1.0 | 270 | > th | dose independent | rect. | 14 | 14 |
| 425 | 70.90 | humidity | 50.0 | 90 | > th | dose independent | rect. | 15 | 12 |
| 427 | 70.90 | wind | 5.0 | 720 | < th | dose dependent | rect. | 3 | 2 |
| 435 | 70.93 | temperature | 20.0 | 720 | < th | dose independent | rect. | 4 | 1 |
| 443 | 70.94 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 1 | 4 |
| 444 | 70.94 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 5 | 4 |
| 488 | 71.02 | radiation | 10.0 | 90 | < th | dose independent | rect. | 11 | 16 |
| 495 | 71.04 | temperature | 25.0 | 270 | < th | dose independent | rect. | 5 | 5 |
| 513 | 71.06 | humidity | 50.0 | 720 | > th | dose independent | rect. | 14 | 3 |
| 532 | 71.09 | radiation | 30.0 | 270 | < th | dose independent | rect. | 13 | 12 |
| 573 | 71.14 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 7 | 20 |
| 589 | 71.17 | wind | 3.0 | 720 | < th | dose independent | rect. | 3 | 2 |
| 599 | 71.18 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 22 | 8 |
| 611 | 71.20 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 7 | 4 |
| 626 | 71.21 | humidity | 50.0 | 270 | > th | dose dependent | sin | 23 | NA |
| 631 | 71.21 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 17 | 13 |
| 659 | 71.25 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 14 |
| 668 | 71.26 | humidity | 50.0 | 720 | > th | dose independent | rect. | 13 | 5 |
| 679 | 71.27 | wind | 5.0 | 720 | < th | dose independent | rect. | 4 | 4 |
| 701 | 71.29 | humidity | 50.0 | 90 | > th | dose independent | rect. | 17 | 13 |
| 717 | 71.31 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 2 |
| 734 | 71.33 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 17 | 2 |
| 775 | 71.37 | wind | 9.0 | 90 | < th | dose dependent | rect. | 3 | 10 |
| 778 | 71.37 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 18 | 13 |
| 788 | 71.39 | wind | 1.0 | 90 | > th | dose independent | rect. | 6 | 11 |
| 797 | 71.40 | wind | 9.0 | 90 | < th | dose dependent | rect. | 17 | 13 |
| 816 | 71.43 | wind | 7.0 | 720 | < th | dose independent | rect. | 22 | 9 |
| 829 | 71.44 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 17 | 2 |
| 834 | 71.45 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 7 | 10 |
| 841 | 71.46 | wind | 7.0 | 10 | < th | dose independent | rect. | 16 | 15 |
| 856 | 71.48 | temperature | 20.0 | 10 | < th | dose independent | rect. | 22 | 7 |
| 859 | 71.48 | wind | 9.0 | 10 | < th | dose independent | rect. | 7 | 10 |
| 875 | 71.49 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 19 | 8 |
| 886 | 71.50 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 5 | 2 |
| 938 | 71.55 | temperature | 25.0 | 720 | < th | dose independent | rect. | 16 | 4 |
| 939 | 71.55 | humidity | 70.0 | 720 | > th | dose independent | rect. | 17 | 4 |
| 942 | 71.55 | temperature | 10.0 | 10 | > th | dose independent | rect. | 7 | 10 |
| 944 | 71.55 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 7 | 10 |
| 947 | 71.55 | temperature | 10.0 | 10 | > th | dose independent | rect. | 17 | 14 |
| 948 | 71.55 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 17 | 14 |
| 949 | 71.55 | radiation | 20.0 | 10 | < th | dose independent | rect. | 17 | 14 |
| 958 | 71.56 | temperature | 25.0 | 720 | < th | dose independent | rect. | 17 | 2 |
| 999 | 71.59 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 7 | 10 |