Os07g0540600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF26 domain containing protein.
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Os07g0540600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF26 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 195.25 | 0.657 | 5.04 | 2.11 | 0.803 | -1.41 | -0.282 | 1.75 | 0.25 | 10.6 | 21.31 | 4248 | -- | -- |
| 196.36 | 0.653 | 5.1 | 1.68 | 0.798 | -1.43 | -0.231 | -- | 0.148 | 10.7 | 18.26 | 3225 | -- | -- |
| 195.56 | 0.651 | 5.04 | 2.11 | 0.804 | -1.41 | -- | 1.81 | 0.249 | 10.6 | 21.4 | 4242 | -- | -- |
| 196.55 | 0.653 | 5.09 | 1.67 | 0.801 | -1.46 | -- | -- | 0.177 | 10.8 | 18.3 | 3242 | -- | -- |
| 228.88 | 0.705 | 5.07 | 2.07 | -- | -1.57 | -- | 1.53 | 0.272 | -- | 21.11 | 3744 | -- | -- |
| 246.86 | 0.737 | 5.16 | 1.05 | 0.871 | -- | -0.271 | -- | -0.142 | 11 | -- | -- | -- | -- |
| 247.16 | 0.736 | 5.16 | 1.04 | 0.873 | -- | -- | -- | -0.143 | 10.9 | -- | -- | -- | -- |
| 225.96 | 0.7 | 5.1 | 1.67 | -- | -1.64 | -- | -- | 0.213 | -- | 18.59 | 2304 | -- | -- |
| 251.61 | 0.743 | 5.15 | -- | 1.19 | -1.27 | -- | -- | -0.0779 | 12 | 18.3 | 3242 | -- | -- |
| 294.48 | 0.802 | 5.19 | 1.02 | -- | -- | -- | -- | -0.149 | -- | -- | -- | -- | -- |
| 275.67 | 0.777 | 5.19 | -- | 0.864 | -- | -- | -- | -0.259 | 10.8 | -- | -- | -- | -- |
| 272.5 | 0.769 | 5.16 | -- | -- | -1.32 | -- | -- | -0.0573 | -- | 20.3 | 833 | -- | -- |
| 321.99 | 0.838 | 5.21 | -- | -- | -- | -- | -- | -0.262 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 189.63 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 13 |
| 4 | 191.28 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 13 |
| 5 | 191.54 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 2 |
| 14 | 192.09 | temperature | 20 | 1440 | > th | dose dependent | rect. | 22 | 6 |
| 22 | 192.41 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 7 |
| 24 | 192.46 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 10 |
| 26 | 192.48 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 52 | 192.76 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 13 |
| 59 | 192.80 | temperature | 30 | 4320 | < th | dose dependent | rect. | 24 | 1 |
| 65 | 192.84 | temperature | 30 | 4320 | < th | dose dependent | rect. | 24 | 3 |
| 71 | 192.90 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 127 | 193.25 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 6 |
| 129 | 193.26 | temperature | 25 | 4320 | < th | dose independent | rect. | 16 | 10 |
| 138 | 193.27 | temperature | 20 | 270 | > th | dose dependent | rect. | 16 | 22 |
| 159 | 193.39 | temperature | 25 | 4320 | < th | dose independent | rect. | 17 | 8 |
| 161 | 193.39 | temperature | 20 | 1440 | > th | dose dependent | sin | 10 | NA |
| 179 | 193.44 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 11 |
| 214 | 193.60 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 11 |
| 235 | 193.71 | temperature | 25 | 4320 | < th | dose independent | sin | 15 | NA |
| 242 | 193.74 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 252 | 193.76 | temperature | 25 | 4320 | > th | dose independent | rect. | 16 | 9 |
| 254 | 193.76 | temperature | 20 | 4320 | > th | dose dependent | sin | 13 | NA |
| 311 | 193.92 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 361 | 194.11 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 20 |
| 399 | 194.26 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 429 | 194.37 | temperature | 25 | 4320 | > th | dose independent | sin | 15 | NA |
| 435 | 194.38 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 449 | 194.40 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 465 | 194.45 | temperature | 25 | 4320 | < th | dose independent | rect. | 14 | 18 |
| 505 | 194.55 | temperature | 10 | 4320 | > th | dose dependent | sin | 12 | NA |
| 506 | 194.55 | temperature | 30 | 4320 | < th | dose dependent | sin | 12 | NA |
| 510 | 194.56 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 523 | 194.59 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 4 |
| 540 | 194.62 | radiation | 30 | 4320 | < th | dose independent | rect. | 15 | 17 |
| 680 | 194.91 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 19 |
| 700 | 194.98 | temperature | 25 | 4320 | > th | dose independent | rect. | 15 | 17 |
| 814 | 195.20 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 23 |