Os07g0538200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF26 domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0538200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF26 domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 339.9 | 0.866 | 9.35 | 1.98 | 2.92 | -2.52 | -0.771 | 1.83 | 0.151 | 0.938 | 80.99 | 1268 | -- | -- |
| 343.93 | 0.864 | 9.37 | 1.88 | 2.95 | -2.37 | -0.554 | -- | 0.147 | 0.911 | 81.18 | 1251 | -- | -- |
| 342.31 | 0.862 | 9.35 | 2.03 | 2.94 | -2.54 | -- | 1.79 | 0.151 | 0.906 | 80.68 | 1260 | -- | -- |
| 345.11 | 0.865 | 9.37 | 1.85 | 2.97 | -2.41 | -- | -- | 0.133 | 0.882 | 81.3 | 1242 | -- | -- |
| 489 | 1.04 | 9.3 | 1.53 | -- | -3.96 | -- | 2.43 | 0.289 | -- | 195.2 | 5 | -- | -- |
| 471.34 | 1.02 | 9.36 | 1.42 | 2.54 | -- | -0.979 | -- | 0.201 | 0.871 | -- | -- | -- | -- |
| 475.35 | 1.02 | 9.35 | 1.46 | 2.54 | -- | -- | -- | 0.206 | 0.834 | -- | -- | -- | -- |
| 499.15 | 1.05 | 9.3 | 1.5 | -- | -3.87 | -- | -- | 0.284 | -- | 195.2 | 5 | -- | -- |
| 426.67 | 0.962 | 9.39 | -- | 3.21 | -2.56 | -- | -- | 0.106 | 0.687 | 112.7 | 1114 | -- | -- |
| 879.5 | 1.39 | 9.31 | 1.55 | -- | -- | -- | -- | 0.253 | -- | -- | -- | -- | -- |
| 531.34 | 1.08 | 9.39 | -- | 2.57 | -- | -- | -- | 0.0438 | 0.859 | -- | -- | -- | -- |
| 558.45 | 1.1 | 9.34 | -- | -- | -3.79 | -- | -- | 0.111 | -- | 227.6 | 5 | -- | -- |
| 942.93 | 1.43 | 9.35 | -- | -- | -- | -- | -- | 0.0812 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 342.07 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 9 |
| 3 | 342.73 | humidity | 80 | 1440 | < th | dose dependent | rect. | 6 | 11 |
| 5 | 342.75 | humidity | 80 | 1440 | < th | dose dependent | rect. | 1 | 16 |
| 34 | 343.97 | humidity | 80 | 1440 | < th | dose dependent | sin | 1 | NA |
| 111 | 346.44 | humidity | 80 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 138 | 346.56 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 139 | 346.57 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 5 |
| 141 | 346.59 | humidity | 80 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 158 | 347.14 | humidity | 80 | 1440 | < th | dose dependent | rect. | 9 | 23 |
| 163 | 347.33 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 5 |
| 165 | 347.44 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 179 | 347.68 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 182 | 347.73 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 231 | 348.77 | humidity | 80 | 1440 | < th | dose independent | sin | 2 | NA |
| 239 | 348.88 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 10 |
| 245 | 349.05 | humidity | 50 | 1440 | > th | dose dependent | rect. | 9 | 8 |
| 407 | 353.03 | humidity | 50 | 1440 | > th | dose dependent | sin | 23 | NA |
| 417 | 353.22 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 22 |
| 422 | 353.26 | radiation | 10 | 1440 | < th | dose dependent | rect. | 10 | 8 |
| 438 | 353.65 | humidity | 80 | 1440 | > th | dose independent | sin | 2 | NA |
| 524 | 355.29 | radiation | 10 | 1440 | < th | dose dependent | rect. | 13 | 5 |
| 526 | 355.31 | radiation | 10 | 1440 | < th | dose dependent | rect. | 10 | 13 |
| 537 | 355.37 | radiation | 10 | 1440 | < th | dose dependent | rect. | 10 | 17 |
| 552 | 355.61 | humidity | 90 | 1440 | < th | dose dependent | rect. | 15 | 1 |
| 557 | 355.72 | humidity | 70 | 1440 | < th | dose independent | rect. | 17 | 22 |
| 560 | 355.74 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 20 |
| 593 | 356.10 | radiation | 10 | 1440 | < th | dose dependent | sin | 19 | NA |
| 609 | 356.26 | humidity | 60 | 1440 | > th | dose independent | rect. | 14 | 3 |
| 618 | 356.36 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 817 | 358.25 | radiation | 10 | 1440 | > th | dose independent | rect. | 8 | 23 |
| 862 | 358.67 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 22 |
| 868 | 358.76 | humidity | 60 | 1440 | < th | dose independent | rect. | 14 | 3 |
| 993 | 359.32 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 7 |