Os07g0537500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF26 domain containing protein.
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Os07g0537500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF26 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1359.27 | 1.73 | 5.5 | -0.313 | 5.44 | -3.51 | -0.627 | -0.656 | -0.112 | 0.4 | 79 | 1055 | 6.2 | -- |
| 1359.64 | 1.72 | 5.49 | -0.242 | 5.46 | -3.57 | -0.746 | -- | -0.115 | 0.384 | 78.81 | 1042 | 6.07 | -- |
| 1360.83 | 1.72 | 5.49 | -0.297 | 5.43 | -3.48 | -- | -0.886 | -0.0909 | 0.394 | 78.96 | 1055 | 6.18 | -- |
| 1362.08 | 1.72 | 5.49 | -0.209 | 5.46 | -3.59 | -- | -- | -0.115 | 0.372 | 78.73 | 1040 | 6.04 | -- |
| 2780.95 | 2.46 | 5.38 | -0.4 | -- | -2.98 | -- | -0.547 | 0.056 | -- | 81 | 1423 | 5.97 | -- |
| 1750.38 | 1.96 | 5.4 | -0.642 | 4.55 | -- | -1.04 | -- | 0.273 | 24 | -- | -- | -- | -- |
| 1755.01 | 1.96 | 5.4 | -0.6 | 4.56 | -- | -- | -- | 0.279 | 23.9 | -- | -- | -- | -- |
| 2357.45 | 2.27 | 5.34 | -0.471 | -- | -6.15 | -- | -- | 0.172 | -- | 83.9 | 1819 | 0.636 | -- |
| 1363.24 | 1.72 | 5.49 | -- | 5.47 | -3.6 | -- | -- | -0.107 | 0.375 | 78.67 | 1041 | 6.01 | -- |
| 3061.49 | 2.59 | 5.3 | -0.461 | -- | -- | -- | -- | 0.34 | -- | -- | -- | -- | -- |
| 1764.5 | 1.96 | 5.39 | -- | 4.55 | -- | -- | -- | 0.346 | 23.9 | -- | -- | -- | -- |
| 1646.21 | 1.89 | 5.25 | -- | -- | -6.73 | -- | -- | 0.559 | -- | 158.2 | 2073 | 4.53e-08 | -- |
| 3067.09 | 2.58 | 5.29 | -- | -- | -- | -- | -- | 0.392 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 1362.18 | humidity | 50 | 720 | > th | dose dependent | rect. | 17 | 5 |
| 25 | 1401.07 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 29 | 1405.85 | humidity | 90 | 720 | < th | dose dependent | rect. | 17 | 7 |
| 41 | 1413.42 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 42 | 1413.46 | humidity | 80 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 44 | 1413.97 | humidity | 80 | 1440 | < th | dose dependent | rect. | 17 | 21 |
| 45 | 1414.02 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 22 |
| 51 | 1415.01 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 6 |
| 61 | 1415.64 | humidity | 70 | 1440 | < th | dose independent | rect. | 17 | 22 |
| 67 | 1416.30 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 69 | 1416.38 | humidity | 80 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 70 | 1416.49 | humidity | 80 | 1440 | < th | dose dependent | rect. | 6 | 23 |
| 100 | 1417.74 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 13 |
| 114 | 1418.38 | humidity | 80 | 1440 | < th | dose independent | rect. | 5 | 10 |
| 133 | 1419.23 | humidity | 80 | 720 | < th | dose dependent | rect. | 17 | 15 |
| 221 | 1422.52 | humidity | 80 | 1440 | < th | dose independent | sin | 2 | NA |
| 257 | 1423.74 | humidity | 80 | 720 | < th | dose dependent | rect. | 17 | 12 |
| 266 | 1424.27 | humidity | 80 | 720 | < th | dose dependent | sin | 12 | NA |
| 268 | 1424.38 | humidity | 80 | 1440 | < th | dose dependent | sin | 20 | NA |
| 310 | 1425.34 | humidity | 80 | 1440 | > th | dose independent | rect. | 5 | 11 |
| 317 | 1425.67 | humidity | 70 | 1440 | < th | dose independent | rect. | 9 | 23 |
| 355 | 1426.51 | humidity | 70 | 1440 | < th | dose independent | rect. | 9 | 11 |
| 384 | 1427.24 | humidity | 50 | 720 | > th | dose dependent | rect. | 17 | 9 |
| 409 | 1427.99 | humidity | 80 | 1440 | > th | dose independent | sin | 1 | NA |
| 414 | 1428.05 | humidity | 90 | 720 | > th | dose dependent | rect. | 19 | 4 |
| 481 | 1429.10 | radiation | 10 | 1440 | > th | dose independent | rect. | 16 | 22 |
| 493 | 1429.36 | humidity | 90 | 720 | < th | dose dependent | sin | 14 | NA |
| 531 | 1430.00 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 23 |
| 549 | 1430.55 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 15 |
| 555 | 1430.63 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 12 |
| 557 | 1430.64 | humidity | 50 | 1440 | > th | dose dependent | rect. | 10 | 13 |
| 560 | 1430.65 | humidity | 50 | 1440 | > th | dose dependent | sin | 21 | NA |
| 569 | 1430.77 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 18 |
| 609 | 1431.58 | humidity | 80 | 1440 | < th | dose independent | rect. | 5 | 16 |
| 622 | 1431.83 | humidity | 70 | 1440 | < th | dose independent | no | NA | NA |
| 678 | 1431.84 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 704 | 1432.03 | humidity | 50 | 1440 | > th | dose dependent | rect. | 4 | 18 |
| 753 | 1432.59 | radiation | 10 | 1440 | > th | dose independent | rect. | 8 | 23 |
| 755 | 1432.60 | humidity | 70 | 1440 | < th | dose independent | sin | 20 | NA |
| 815 | 1433.81 | humidity | 70 | 720 | > th | dose independent | sin | 13 | NA |
| 824 | 1433.97 | humidity | 80 | 1440 | > th | dose independent | rect. | 5 | 16 |
| 845 | 1434.31 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 908 | 1435.50 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 910 | 1435.52 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 929 | 1435.81 | humidity | 70 | 1440 | > th | dose independent | rect. | 2 | 22 |
| 935 | 1435.87 | humidity | 70 | 1440 | > th | dose independent | rect. | 4 | 20 |
| 975 | 1436.06 | humidity | 70 | 1440 | > th | dose independent | rect. | 22 | 23 |
| 976 | 1436.07 | humidity | 70 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 977 | 1436.08 | humidity | 70 | 1440 | > th | dose independent | no | NA | NA |
| 985 | 1436.11 | humidity | 70 | 1440 | > th | dose independent | rect. | 6 | 23 |