Os07g0537200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF26 domain containing protein.
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Os07g0537200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF26 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 158.07 | 0.591 | 6.89 | -0.775 | 0.906 | 0.694 | 1.12 | -0.144 | 0.45 | 22.9 | 17.74 | 89 | -- | -- |
| 158.12 | 0.586 | 6.88 | -0.782 | 0.905 | 0.693 | 1.02 | -- | 0.451 | 22.9 | 17.74 | 89 | -- | -- |
| 160.34 | 0.59 | 6.89 | -0.775 | 0.874 | 0.724 | -- | 0.677 | 0.445 | 22.7 | 17.75 | 89 | -- | -- |
| 162.36 | 0.593 | 6.89 | -0.81 | 0.879 | 0.73 | -- | -- | 0.449 | 22.7 | 17.74 | 89 | -- | -- |
| 184.45 | 0.633 | 6.86 | -0.724 | -- | 1.23 | -- | 0.665 | 0.474 | -- | 15.7 | 75 | -- | -- |
| 172.45 | 0.616 | 6.9 | -0.819 | 1.42 | -- | 1.13 | -- | 0.403 | 23.6 | -- | -- | -- | -- |
| 178 | 0.625 | 6.91 | -0.864 | 1.41 | -- | -- | -- | 0.399 | 23.6 | -- | -- | -- | -- |
| 185.32 | 0.634 | 6.86 | -0.772 | -- | 1.17 | -- | -- | 0.496 | -- | 12.8 | 74 | -- | -- |
| 179.15 | 0.623 | 6.88 | -- | 0.82 | 0.762 | -- | -- | 0.536 | 22.6 | 15.69 | 89 | -- | -- |
| 303.49 | 0.814 | 6.87 | -0.826 | -- | -- | -- | -- | 0.414 | -- | -- | -- | -- | -- |
| 197.7 | 0.658 | 6.88 | -- | 1.4 | -- | -- | -- | 0.495 | 23.5 | -- | -- | -- | -- |
| 199.01 | 0.657 | 6.84 | -- | -- | 1.18 | -- | -- | 0.541 | -- | 12.07 | 75 | -- | -- |
| 321.46 | 0.837 | 6.85 | -- | -- | -- | -- | -- | 0.506 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 153.72 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 21 |
| 7 | 155.09 | radiation | 20 | 90 | < th | dose independent | rect. | 6 | 17 |
| 8 | 155.25 | radiation | 30 | 90 | < th | dose dependent | rect. | 6 | 14 |
| 10 | 155.35 | radiation | 30 | 90 | < th | dose dependent | rect. | 6 | 17 |
| 11 | 155.38 | humidity | 50 | 10 | > th | dose dependent | rect. | 6 | 14 |
| 12 | 155.40 | radiation | 20 | 90 | < th | dose independent | rect. | 6 | 14 |
| 18 | 155.72 | radiation | 20 | 90 | < th | dose dependent | sin | 22 | NA |
| 20 | 155.88 | atmosphere | 995 | 90 | > th | dose dependent | rect. | 17 | 16 |
| 40 | 156.60 | radiation | 20 | 10 | < th | dose independent | rect. | 6 | 17 |
| 53 | 157.02 | temperature | 15 | 270 | > th | dose dependent | rect. | 20 | 8 |
| 65 | 157.19 | radiation | 20 | 90 | < th | dose independent | rect. | 11 | 23 |
| 67 | 157.22 | temperature | 20 | 270 | > th | dose independent | rect. | 20 | 7 |
| 71 | 157.33 | radiation | 20 | 10 | < th | dose independent | rect. | 6 | 9 |
| 72 | 157.34 | radiation | 20 | 10 | < th | dose independent | rect. | 6 | 14 |
| 73 | 157.37 | radiation | 30 | 10 | < th | dose dependent | rect. | 6 | 16 |
| 89 | 157.56 | radiation | 30 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 93 | 157.61 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 9 |
| 101 | 157.69 | radiation | 40 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 112 | 157.76 | radiation | 20 | 90 | < th | dose independent | rect. | 5 | 23 |
| 113 | 157.76 | radiation | 20 | 90 | < th | dose dependent | rect. | 6 | 11 |
| 117 | 157.79 | radiation | 30 | 10 | < th | dose dependent | rect. | 6 | 4 |
| 118 | 157.81 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 10 |
| 122 | 157.85 | radiation | 20 | 90 | < th | dose dependent | rect. | 6 | 9 |
| 134 | 157.97 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 9 | 21 |
| 144 | 158.07 | atmosphere | 1005 | 270 | > th | dose dependent | rect. | 1 | 7 |
| 148 | 158.12 | radiation | 10 | 90 | > th | dose independent | rect. | 9 | 9 |
| 161 | 158.12 | atmosphere | 1000 | 270 | > th | dose dependent | rect. | 3 | 5 |
| 165 | 158.16 | humidity | 70 | 10 | > th | dose independent | rect. | 6 | 14 |
| 172 | 158.20 | radiation | 20 | 10 | < th | dose dependent | rect. | 6 | 8 |
| 183 | 158.30 | temperature | 20 | 10 | > th | dose dependent | rect. | 20 | 22 |
| 188 | 158.32 | atmosphere | 995 | 270 | > th | dose dependent | rect. | 15 | 17 |
| 190 | 158.34 | radiation | 20 | 90 | < th | dose independent | sin | 22 | NA |
| 231 | 158.63 | atmosphere | 1015 | 270 | < th | dose dependent | rect. | 20 | 18 |
| 249 | 158.73 | atmosphere | 1015 | 90 | < th | dose dependent | rect. | 21 | 20 |
| 255 | 158.80 | atmosphere | 1000 | 90 | > th | dose independent | rect. | 17 | 16 |
| 270 | 158.88 | radiation | 20 | 90 | < th | dose independent | rect. | 17 | 23 |
| 275 | 158.90 | radiation | 20 | 90 | < th | dose independent | rect. | 17 | 17 |
| 288 | 158.96 | radiation | 20 | 90 | < th | dose independent | no | NA | NA |
| 290 | 158.99 | radiation | 20 | 30 | < th | dose independent | rect. | 6 | 4 |
| 291 | 158.99 | radiation | 20 | 90 | < th | dose independent | rect. | 6 | 9 |
| 318 | 159.07 | radiation | 10 | 90 | > th | dose dependent | rect. | 12 | 23 |
| 325 | 159.11 | radiation | 20 | 90 | < th | dose independent | rect. | 1 | 23 |
| 331 | 159.13 | temperature | 20 | 10 | > th | dose independent | rect. | 9 | 21 |
| 335 | 159.14 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 20 | 10 |
| 349 | 159.20 | radiation | 10 | 90 | > th | dose independent | sin | 22 | NA |
| 356 | 159.24 | radiation | 20 | 90 | > th | dose independent | rect. | 12 | 23 |
| 360 | 159.26 | radiation | 20 | 90 | < th | dose independent | rect. | 15 | 23 |
| 374 | 159.34 | atmosphere | 1015 | 270 | < th | dose dependent | rect. | 20 | 7 |
| 380 | 159.36 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 22 | 8 |
| 415 | 159.44 | radiation | 30 | 90 | < th | dose dependent | no | NA | NA |
| 425 | 159.47 | wind | 9 | 30 | < th | dose dependent | rect. | 9 | 21 |
| 443 | 159.55 | atmosphere | 1000 | 720 | > th | dose dependent | rect. | 20 | 9 |
| 449 | 159.57 | atmosphere | 1000 | 720 | > th | dose dependent | rect. | 20 | 11 |
| 474 | 159.62 | atmosphere | 1015 | 90 | < th | dose dependent | rect. | 23 | 16 |
| 494 | 159.66 | atmosphere | 1010 | 10 | < th | dose dependent | rect. | 22 | 17 |
| 512 | 159.70 | radiation | 20 | 270 | < th | dose independent | rect. | 3 | 16 |
| 569 | 159.82 | radiation | 30 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 583 | 159.86 | atmosphere | 1000 | 10 | > th | dose independent | rect. | 6 | 3 |
| 601 | 159.90 | radiation | 20 | 90 | > th | dose independent | no | NA | NA |
| 723 | 159.90 | radiation | 40 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 782 | 160.02 | atmosphere | 1000 | 10 | > th | dose independent | rect. | 6 | 16 |
| 785 | 160.02 | radiation | 1 | 90 | > th | dose dependent | rect. | 8 | 22 |
| 813 | 160.09 | radiation | 40 | 90 | < th | dose dependent | rect. | 17 | 17 |
| 841 | 160.13 | wind | 1 | 270 | > th | dose dependent | rect. | 3 | 4 |
| 851 | 160.15 | temperature | 20 | 270 | > th | dose independent | rect. | 8 | 19 |
| 885 | 160.20 | radiation | 1 | 90 | > th | dose dependent | rect. | 8 | 10 |
| 905 | 160.21 | radiation | 30 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 907 | 160.22 | humidity | 60 | 10 | > th | dose dependent | rect. | 6 | 3 |
| 925 | 160.25 | radiation | 30 | 270 | < th | dose dependent | rect. | 13 | 19 |
| 960 | 160.32 | atmosphere | 1000 | 10 | > th | dose independent | rect. | 6 | 14 |